 |
Job Description | P76399 | Confidence | 9.66% | Date | Thu Jan 5 12:22:40 GMT 2012 |
Rank | 94 | Aligned Residues | 61 |
% Identity | 13% | Template | c2y9jt_ |
PDB info |
PDB header:protein transport | Chain: T: PDB Molecule:protein prgh; |
PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution
|
Resolution | 6.40 Å |
|
 |
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
. | . | . | . | . | . | . | . | 320 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | V | T | D | S | V | Q | D | V | R | N | A | G | M | T | N | A | K | P | . |
A | I | L | L | M | I | R | K | L | P | E | A | N | I | I | Q | T | V | D | S | I | R | A | K | L | P | E | L | Q | E | T | I | . |
P | A | A | I | D | L | Q | I | A |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |
Template Sequence |   |
A | R | V | H | I | S | Y | D | I | D | A | G | E | N | G | R | P | P | K | P | V | H | L | S | A | L | A | V | Y | E | R | G | S | P | L | A | H | Q | I | S | D | I | K | R | F | L | K | N | S | F | A | D | V | D | Y | D | N | I | S | V | V | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
| B | T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |
| T | T |
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|