|   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | P | L | E | R | S | L | G | R | I | A | G | V | S | E | M | T | S | S | S | S | L | G | S | T | R | I | I | L | Q | F | D | F | D | R | D | I | N | G | A | A | R | D | V | Q | A | A | I | N | A | A | Q | S | L | L | P | S | G | M | P | S | R | P | T | Y | R | K | A | N | P | S | D | A | P | I | M | I | L | T |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |
|   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | N | I | E | E | N | I | G | Q | L | L | G | V | Q | S | I | Q | V | S | L | E | N | K | . |
. |
T | A | Q | V | K | Y | D | P | S | C | T | S | P | V | A | L | Q | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | A | L | P | P | G | N | F | K | V | S | L | T | C | S | T | T | L | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S | B | T | T |  |  |  |  |  |  |  | T | T | T | T | . | . |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | T | T | S | S | S | S |
| S |  |  |  |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | D | T | Y | S | Q | G | E | L | Y | D | F | A | S | T | Q | L | A | P | T | I | S | Q | I | D | G | V | G | D | V | D | V | G | G | S | S | L | P | A | V | R | V | G | L | N | P | Q | A | L | F | N | Q | G | V | S | L | D | D | V | R | T | A | V | S | N |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   | . | . | . | . | . | . |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   | . |   |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
I | A | G | M | T | . |
. |
. |
. |
. |
. |
C | A | S | C | V | H | S | I | E | G | M | I | S | Q | L | E | G | V | Q | Q | I | S | V | S | L | A | . |
E | G | T | A | T | V | L | Y | N | P | A | V | . |
. |
. |
. |
. |
I | S | P | E | E | L | R | A | A | I | E | D |
Template Known Secondary structure |   |
 | S |
|
|
| . | . | . | . | . | . | S | T |  |  |  |  |  |  |  |  |  | G | G | G | S | S | S |  |  |  |  |  |  |  | T | T | . | T | T |  |  |  |  |  |  |
| T | T | T | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . |
  |