Job Description P76399 Confidence 100.00% Date Thu Jan 5 12:22:40 GMT 2012 Rank 2 Aligned Residues 984 % Identity 28% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		Y	R	P	V	A	T	I	L	L	S	V	A	I	T	L	C	G	I	L	G	F	R	M	L	P	V	A	P	L	P	Q	V	D	F	P	V	I	I	V	S	A	S	L	P	G	A	S	P	E	T	M	A	S	S	V	A	T	P	L	E	R	S	L	G	R	I	A	G	V	S	E	M	T	S	S	S	.	S	L	G
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		D	R	P	I	F	A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	I	A	P	P	A	V	T	I	S	A	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	T	Q	V	I	E	Q	N	M	N	G	I	D	N	L	M	Y	M	S	S	N	S	D	S	T	G
Template Known Secondary structure																							T	T	S				S	S				S											T	T										T							T					S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		S	T	R	I	I	L	Q	F	D	F	D	R	D	I	N	G	A	A	R	D	V	Q	A	A	I	N	A	A	Q	S	L	L	P	S	G	M	P	S	R	P	T	Y	R	K	A	N	P	S	D	A	P	I	M	I	L	T	L	T	.	.	S	D	T	Y	S	Q	G	E	L	Y	D	F	A	S	T	Q	L	A	P	T
Query Conservation																																																												.	.
Alig confidence																																						.																						.	.
Template Conservation																																						.
Template Sequence		T	V	Q	I	T	L	T	F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L	A	M	P	L	L	P	Q	E	V	.	Q	Q	Q	G	V	S	V	E	K	S	S	S	S	F	L	M	V	V	G	V	I	N	T	D	G	T	M	T	Q	E	D	I	S	D	Y	V	A	A	N	M	K	D	A
Template Known Secondary structure											T	T															T	T	T	G	G	G	S					.		T	S																				S	S	S				T	T								T	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		I	S	Q	I	D	G	V	G	D	V	D	V	G	G	S	S	L	P	A	V	R	V	G	L	N	P	Q	A	L	F	N	Q	G	V	S	L	D	D	V	R	T	A	V	S	N	A	N	V	R	K	P	Q	G	A	L	.	.	.	.	.	.	E	D	G	T	H	R	W	Q	I	Q	T	N	D	E	L	K	T	A	A
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																	.																																								.	.	.	.	.	.
Template Conservation																	.
Template Sequence		I	S	R	T	S	G	V	G	D	V	Q	L	F	G	S	.	Q	Y	A	M	R	I	W	M	N	P	N	E	L	N	K	F	Q	L	T	P	V	D	V	I	T	A	I	K	A	Q	N	A	Q	V	A	A	G	Q	L	G	G	T	P	P	V	K	G	Q	Q	L	N	A	S	I	I	A	Q	T	R	L	T	S	T	E
Template Known Secondary structure			T	T	T	T	T							S	S		.															T	T	T														S									S		S	S			T	T															S
Template Predicted Secondary structure																	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		E	Y	Q	P	L	I	I	H	.	Y	N	N	G	G	A	V	R	L	G	D	V	A	T	V	T	D	S	V	Q	D	V	R	N	A	G	M	T	N	A	K	P	A	I	L	L	M	I	R	K	L	P	E	A	N	I	I	Q	T	V	D	S	I	R	A	K	L	P	E	L	Q	E	T	I	P	A	A	I	D	L	Q
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		E	F	G	K	I	L	L	K	V	N	Q	D	G	S	R	V	L	L	R	D	V	A	K	I	E	L	G	G	E	N	Y	D	I	I	A	E	F	N	G	Q	P	A	S	G	L	G	I	K	L	A	T	G	A	N	A	L	D	T	A	A	A	I	R	A	E	L	A	K	M	E	P	F	F	P	S	G	L	K	I	V
Template Known Secondary structure					T							T	T	T																S			S						T	T												T	T			T					S			S		S	S	T	T	T	S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	D	R	S	P	T	I	R	A	S	L	E	E	V	E	Q	T	L	I	I	S	V	A	L	V	I	L	V	V	F	L	F	L	R	S	G	R	A	T	I	I	P	A	V	S	V	P	V	S	L	I	G	T	F	A	A	M	Y	L	C	G	F	S	L	N	N	L	S	L	M	A	L	T	I	A	T	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	Y	D	T	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L
Template Known Secondary structure				S	B	S																																	T	T	T	T	T	T	T	T	T	T																T			S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	V	D	D	A	I	V	V	L	E	N	I	A	R	H	L	.	E	A	G	M	K	P	L	Q	A	A	L	Q	G	T	R	E	V	G	F	T	V	L	S	M	S	L	S	L	V	A	V	F	L	P	L	L	L	M	G	G	L	P	G	R	L	L	R	E	F	A	V	T	L	S	V	A	I	G	I	S	L	L	V
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V
Template Known Secondary structure																				T				S							T																T	T	T	S	T	T	T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	L	T	P	M	M	C	G	W	M	L	K	A	S	K	P	R	E	Q	K	R	L	R	G	F	G	R	M	L	V	A	L	Q	Q	G	Y	G	K	S	L	K	W	V	L	N	H	T	R	L	V	G	V	V	L	L	G	T	I	A	L	N	I	W	L	Y	I	S	I	P	K	T	F	F	P	E	Q	D	T
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	I	L	T	P	A	L	C	A	T	M	L	K	F	.	.	.	.	.	.	.	.	.	G	W	F	N	R	M	F	E	K	S	T	H	H	Y	T	D	S	V	G	G	I	L	R	S	T	G	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y	L	F	V	R	L	P	S	S	F	L	P	D	E	D	Q
Template Known Secondary structure		T	T	T									S				.	.	.	.	.	.	.	.	.												T																																	S	S		B		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.										500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600							.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.				.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.																								.	.	.
Query SS confidence																																													.	.	.	.	.	.																								.	.	.
Query Sequence		G	V	L	M	G	G	I	Q	A	D	Q	S	I	S	F	Q	A	M	R	G	K	L	Q	D	F	M	K	I	I	R	D	D	P	A	V	D	N	V	T	G	F	T	G	.	.	.	.	.	.	G	S	R	V	N	S	G	M	M	F	I	T	L	K	P	R	D	E	R	S	E	T	A	.	.	.	Q	Q	I	I	D
Query Conservation																																													.	.	.	.	.	.																								.	.	.
Alig confidence																																													.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		G	V	F	M	T	M	V	Q	L	P	A	G	A	T	Q	E	R	T	Q	K	V	L	N	E	V	T	H	Y	Y	L	T	K	E	K	N	N	V	E	S	V	F	A	V	N	G	F	G	F	A	G	R	G	Q	N	T	G	I	A	F	V	S	L	K	D	W	A	D	R	P	G	E	E	N	K	V	E	A	I	T	M
Template Known Secondary structure		S										T	T																			T	S		T	T	T												S	S																G	G	G			S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.		.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		R	L	R	V	K	L	A	K	E	P	G	A	N	L	F	L	M	A	V	Q	D	I	R	V	G	G	R	Q	S	N	A	S	Y	Q	.	Y	T	L	L	S	D	D	L	A	A	L	R	E	W	E	P	K	I	R	K	K	L	A	T	L	P	E	L	A	D	V	N	S	D	Q	Q	D	N	G	A	E	M	N	L	V
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		R	A	T	R	A	F	S	Q	I	K	D	A	M	V	F	A	F	N	L	P	A	I	V	E	L	G	T	A	T	G	F	D	F	E	L	I	D	Q	A	G	L	G	H	E	K	L	T	Q	A	R	N	Q	L	L	A	E	A	A	K	H	P	M	L	T	S	V	R	P	N	G	L	E	D	T	P	Q	F	K	I	D
Template Known Secondary structure								T	T	S		S	S					B				S	S		S	S			S	S										S	S																														S
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	R	D	T	M	A	R	L	G	I	D	V	Q	A	A	N	S	L	L	N	N	A	F	G	Q	R	Q	I	S	T	I	Y	Q	P	M	N	Q	Y	K	V	V	M	E	V	D	P	R	Y	T	Q	D	I	S	A	L	E	K	M	F	V	I	N	N	E	G	K	A	I	P	L	S	Y	F	A	K	W	Q	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	V	P	F	S	A	F	S	S	S	R	W	E
Template Known Secondary structure											T															T										T	T											G	G	G	S	S	S	G	G	G	G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		731	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	P	L	S	V	N	H	Q	G	L	S	A	A	S	T	I	S	F	N	L	P	T	G	K	S	L	S	D	A	S	A	A	I	D	R	A	M	T	Q	L	G	V	P	S	T	V	R	G	S	F	A	G	T	A	Q	V	F	Q	E	T	M	N	S	Q	V	I	L	I	I	A	A	I	A	T	V	Y	I	V	L
Query Conservation
Alig confidence																																										.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	S	P	R	L	E	R	Y	N	G	L	P	S	M	E	I	L	G	Q	A	A	P	G	K	S	T	G	E	A	M	E	L	M	E	Q	L	A	S	K	.	.	L	P	T	G	V	G	Y	D	W	S	G	N	Q	A	P	S	.	.	.	.	.	.	.	.	.	L	Y	A	I	S	L	I	V	V	F	L	C	L
Template Known Secondary structure					S						T	T												S	S	S		T													T	.	.	S		T	T								T					.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure																																										.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.										.	.	.	870	.	.	.	.	.	.	.	.	.
		868	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	Y	E	S	Y	V	H	P	L	T	I	L	S	T	L	P	S	A	G	V	G	A	L	L	A	L	E	L	F	N	A	P	F	S	L	I	A	L	I	G	I	M	L	L	I	G	I	V	K	K	N	A	I	M	M	V	D	F	A	L	E	A	Q	R	H	G	N	L	T	P	Q	E	A	I	F	Q	A	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V
Template Known Secondary structure		T	S	S			S	S	S	G	G	G	T	G	G	G																S	S			B																															S	S	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
		948	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	F	R	P	I	M	M	T	T	L	A	A	L	F	G	A	L	P	L	V	L	S	G	G	D	G	S	E	L	R	Q	P	L	G	I	T	I	V	G	G	L	V	M	S	Q	L	L	T	L	Y	T	T	P	V	V	Y	L	F	F	D	R	L	R	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R
Template Known Secondary structure		T	T	T															S					T	T			S	S		S																					T	S	S	S	S	S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		969	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.