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Job DescriptionP76071
Confidence21.37%DateThu Jan 5 12:18:09 GMT 2012
Rank12Aligned Residues103
% Identity15%Templated1hyva_
SCOP infoRibonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210. ........220.. .......230.........240.........250....
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Query Sequence  AHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLH. . GEEQFVSADAG. . YQGAPQREELAEVDVDWLIAERPGKVKTLKQN
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Template Sequence  ILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTV. KAAWWAGIKQ. . . . . . . . . . . . . . .
Template Known Secondary structure  TTT

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   73......80.........90.........100.........110.........120...... ...130......
 
   255....260.........270.........280.........290.........300.........310....
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Query Sequence  PRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFR
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Template Sequence  . . . . . . . . . . . . . . EFGQGVIESMNKELKKII. . . GQVRDQAEHLKTAVQMAVFIHNKKR
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...GGGSSS

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   138.140.........150..... ....160.........170.........180
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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