Job Description P76071 Confidence 35.87% Date Thu Jan 5 12:18:09 GMT 2012 Rank 9 Aligned Residues 114 % Identity 15% Template c1bcoA_ PDB info PDB header:transposase Chain: A: PDB Molecule:bacteriophage mu transposase; PDBTitle: bacteriophage mu transposase core domain Resolution 2.40 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	M	M	T	Q	G	T	L	V	D	A	T	I	I	E	A	P	S	S	T	K	N	K	E	Q	Q	R	D	P	E	M	H	Q	T	K	K	G	N	Q	W	H	F	G	M	K	A	H	I	G	V	D	A	K	S	G	L	T	H	S	L	V	T	T	A	A	N	E	H	D	L	N	Q	L	G	N	L	L	H
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		E	H	L	D	A	M	Q	W	I	N	G	D	G	Y	L	H	N	V	F	V	R	W	F	N	G	D	V	I	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	W	F	W	Q	D	V	K	T	R	K	I	L	G	W	R	C	D	V	S	E	.	.	N	I	D	S	I	R	L	S	F	M
Template Known Secondary structure						T	T	T										S	B					T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T										S	S		.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.
										212	.	.	.	.	.	.	.	220	.	.																				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	G	E	E	Q	F	V	S	A	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	G	A	P	Q	R	E	E	L	A	E	V	D	V	D	W	L	I	A	E	R	P	G	K	V	K	T	L	K	Q	N	P	R	K	N	K	T	A	I	N	I
Query Conservation		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	T	R	Y	G	I	P	E	D	F	H	I	T	I	D	N	T	R	G	A	A	N	K	W	L	T	G	G	A	P	N	R	Y	R	F	K	V	K	E	D	D	P	K	G	L	F	L	L	M	G	A	K	M	H	W	T	S	V	V	A	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	S								T	T	S	T	T	T	T	T	T	S				T	T	T	T	B	S		B													T						S	S	S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		265	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		E	Y	M	K	A	S	I	R	A	R	.	.	.	V	E	H	P	F	R	I	I	K	R	Q
Query Conservation												.	.	.
Alig confidence		.	.	.	.	.	.	.				.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	W	G	Q	A	K	P	V	E	R	A	F	G	V	G	G	L	E
Template Known Secondary structure		.	.	.	.	.	.	.				S	S		S	S	G	G	G	S	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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