Return to main results Retrieve Phyre Job Id

Job DescriptionP08956
Confidence99.93%DateThu Jan 5 11:01:43 GMT 2012
Rank48Aligned Residues166
% Identity25%Templated2fwra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   434.....440.........450.........460.........470.........480.........490.........500.........510...
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  FADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGA
Query Conservation 
          

 

  

  
        
  

 







 


 

  
      








  
  
    
Alig confidence 

























.....























.....



















Template Conservation             

 

 


      .....   

   






         .....    
 
 
   
  
    
Template Sequence  IPTPYFDAEISLRDYQEKALERWLVD. . . . . KRGCIVLPTGSGKTHVAMAAINEL. . . . . STPTLIVVPTLALAEQWKER
Template Known Secondary structure 












TTT.....T

TTS
.....
S
SS
Template Predicted Secondary structure 














.....








.....







Template SS confidence 















































































   83......90.........100........ .110.........120.........130.. .......140.........150..
 
   514.....520.........530.........540.........550.........560.........570.........580.........590...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  FEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQF
Query Conservation 
            
                
 
 
 
 
               










               
Alig confidence 















.........






















.....















...........
Template Conservation          
       .........         
             .....   





 
     ...........
Template Sequence  LGIFGEEYVGEFSGRI. . . . . . . . . KELKPLTVSTYDSAYVNAEKLGN. . . . . RFMLLIFDEVHHLPAE. . . . . . . . . . .
Template Known Secondary structure  GGGG
GGGBSSS
.........B


STTT.....T
STGGGTTST...........
Template Predicted Secondary structure 






.........





.....






...........
Template SS confidence 















































































   153......160........ .170.........180.........190. ........200.......
 
   594.....600.........610.. .......620..... ....630.........640..
Predicted Secondary structure 




.





......







Query SS confidence 


















.












. . . . . .
















Query Sequence  RSQLDYVSAYRRILDHFDA. VKIALTATPALHT. . . . . . VQIFGEPVYRYTYRTAV
Query Conservation            
 

  


.  






   
......   

  
  


  

Alig confidence  ........










.












......
















Template Conservation  ........        
     






 
 
     
  
 
  
       
 
Template Sequence  . . . . . . . . SYVQIAQMSIAPFRLGLTATFEREDGRHEILKEVVGGKVFELFPDSLA
Template Known Secondary structure  ........TTT


SS



TTSGGGST



T
Template Predicted Secondary structure  ........
















Template SS confidence 























































   208.210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions