|   |
417 | . | . | 420 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | L | L | E | M | L | G | S | E | P | Q | K | . |
. |
. |
. |
. |
. |
. |
Q | N | Q | W | F | A | D | N | P | G | M | S | E | L | G | L | R | Y | Y | Q | E | D | A | V | R | A | V | E | K | A | I | V | K | G | Q | . |
Q | E | I | L | L | A | M | A | T | G | T | G | K | T | R | T | A | I | A | M | M | F | R | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   | . |
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
A | E | L | L | D | I | Y | A | Q | R | A | A | K | E | G | F | A | F | K | H | D | R | E | Q | Y | Q | L | F | C | D | S | F | P | F | E | T | T | P | D | Q | A | Q | A | I | N | A | V | L | S | D | M | C | Q | P | L | A | M | D | R | L | V | C | G | D | V | G | F | G | K | T | E | V | A | M | R | A | A | F | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | T |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  |
|
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
566 | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . |
  |
  |   |
489 | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | S | Q | R | F | K | R | I | L | F | L | V | D | R | R | S | L | G | E | Q | A | L | G | A | F | E | D | T | R | I | N | G | D | T | F | N | S | I | F | D | I | K | . |
. |
. |
. |
. |
. |
. |
G | L | T | D | K | F | P | E | D | S | T | K | I | H | V | A | T | V | Q | S | L | V | K | R | T | L | Q | S | D | E |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |   |   |   | . | . |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
| . | . | . | . | . | . | . |   |   |
Template Sequence |   |
V | D | N | H | . |
. |
K | Q | V | A | V | L | V | P | T | T | L | L | A | Q | Q | H | Y | D | N | F | R | D | R | F | A | N | W | P | V | R | I | E | M | I | S | R | F | R | S | A | K | E | Q | T | Q | I | L | A | E | V | A | E | G | K | I | D | I | L | I | G | T | H | K | L | L | . |
. |
. |
. |
. |
. |
. |
Q | S |
Template Known Secondary structure |   |
 | T | T | T | . | . |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T |
|
|  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
| T |  |  |  | . | . | . | . | . | . | . |  | S |
Template Predicted Secondary structure |   |
 |  |  |
| . | . |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
646 | . | . | . | |
|
650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | |
|
|
|
|
|
|
. | . |
  |
  |   |
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | |
. | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | M | P | V | A | R | Y | D | C | I | V | V | D | E | A | H | R | G | Y | I | L | D | K | E | Q | T | E | G | E | L | Q | F | R | S | Q | L | D | Y | V | S | A | Y | R | R | I | L | D | H | F | . |
D | A | V | K | I | A | L | T | A | T | P | A | L | H | T |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
| . |
|
|   |   |
|
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
D | V | K | F | K | D | L | G | L | L | I | V | D | E | E | H | R | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | R | H | K | E | R | I | K | A | M | R | A | N | V | D | I | L | T | L | T | A | T | P | I | P | R | T |
Template Known Secondary structure |   |
|
|
|
| S | S |  |  |  |  |  |  |  | S | G | G | G | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | S | S |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
717 | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . |
  |