Return to main results Retrieve Phyre Job Id

Job DescriptionP08956
Confidence99.84%DateThu Jan 5 11:01:43 GMT 2012
Rank60Aligned Residues164
% Identity23%Templated1wp9a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470.........480.........490.........500.........510.........520..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGD
Query Conservation    

 

  

  
        
  

 







 


 

  
      








  
  
    
        
Alig confidence 














......





























.



























Template Conservation    

 

 
 
   
......  
 

  






 
    
        .     
 
   
                
Template Sequence  IQPRIYQEVIYAKCK. . . . . . ETNCLIVLPTGLGKTLIAMMIAEYRLTKYG. GKVLMLAPTKPLVLQHAESFRRLFNLPP
Template Known Secondary structure 


GG......GS


TTS
S
.S

SSB
S
G
Template Predicted Secondary structure 



......










.












Template SS confidence 















































































   8.10.........20.. .......30.........40.........50.. .......60.........70.........80
 
   523......530......... 540.........550.........560.........570.........580.........590.........600
Predicted Secondary structure 










..




















Query SS confidence 
















. .




























































Query Sequence  TFNSIFDIKGLTDKFPE. . DSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYV
Query Conservation      
            ..    
 
 
 
 
               










                      
Alig confidence 
















..




















..


































...
Template Conservation                         
       
        ..        




 
          
         ...
Template Sequence  EKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGR. . ISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK. . .
Template Known Secondary structure  GG
S
S

S
TTS..

TTS
STGGG
STT

S...
Template Predicted Secondary structure 


















..













...
Template SS confidence 















































































   81........90.........100.........110.........120 .........130.........140.........150.....
 
   601........610.........620........
Predicted Secondary structure 










Query SS confidence 



























Query Sequence  SAYRRILDHFDAVKIALTATPALHTVQI
Query Conservation     
 

  


  






   
   
Alig confidence  ..........

















Template Conservation  ..........   

 



        
Template Sequence  . . . . . . . . . . NPLVIGLTASPGSTPEKI
Template Known Secondary structure  ..........S

S
S
SS
Template Predicted Secondary structure  ..........








Template SS confidence 



























   156...160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions