Return to main results Retrieve Phyre Job Id

Job DescriptionP08956
Confidence98.17%DateThu Jan 5 11:01:43 GMT 2012
Rank146Aligned Residues99
% Identity29%Templated1t5la1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   449450.........460.........470.........480.........490.........500.........510.........520........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  QEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGDTFNSIF
Query Conservation 
  

  
        
  

 







 


 

  
      








  
  
    
            
 
Alig confidence 






































.....



































Template Conservation 
  

  
   
  
     
 







   
 
   .....   
 



 
   
  
  

   
    
  
 
Template Sequence  QPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQ. . . . . VNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVS
Template Known Secondary structure  T
S
TTS
.....T


SS
TTS

Template Predicted Secondary structure 









.....












Template SS confidence 















































































   17..20.........30.........40.........50..... ....60.........70.........80.........90.
 
   529 530.........540.........550..
Predicted Secondary structure 
..............................











Query SS confidence 
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






















Query Sequence  D. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IKGLTDKFPEDSTKIHVATVQSL
Query Conservation   ..............................              
 
 
 
 
Alig confidence 
..............................






















Template Conservation    
 
 

   
  
       
   
    

 

  
      





 

Template Sequence  YYDYAQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCI
Template Known Secondary structure  GGGT


STTTT


S



S

GGGG
Template Predicted Secondary structure 


























Template SS confidence 





















































   92.......100.........110.........120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions