Return to main results Retrieve Phyre Job Id

Job DescriptionP08956
Confidence99.94%DateThu Jan 5 11:01:43 GMT 2012
Rank43Aligned Residues157
% Identity19%Templated1rifa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases DNA helicase UvsW
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  LGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGD
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Template Sequence  IEPHWYQKDAVFEGLVN. . . . . RRRILNLPTSAGRSLIQALLARYYLENYE. GKILIIVPTTALTTQMADDFVDYRLFSH
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G
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   112.......120........ .130.........140.........150....... ..160.........170.........180.....
 
   523......530.........540.........550.........560.........570.........580.........590.........600..
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Query Sequence  TFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSA
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Template Sequence  AMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFS. . . . . QFGMMMNDECHLATGK. . . . . . . . . . . . . . . . . . . S
Template Known Secondary structure  GG
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GGGGG.....GTGGG

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   186...190.........200.........210.........220.... .....230.........240 .
 
   603......610 .. .......620.........
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Query Sequence  YRRILDHF. DA. VKIALTATPALHTVQIF
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Template Sequence  ISSIISGLNNCMFKFGLSGSLRDGKANIM
Template Known Secondary structure  TTT
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   242.......250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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