|   |
442 | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | |
. | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | G | L | R | Y | Y | Q | E | D | A | V | R | A | V | E | K | A | I | V | K | G | Q | Q | . |
E | I | L | L | A | M | A | T | G | T | G | K | T | R | T | A | I | A | M | M | F | R | L | I | Q | S | Q | R | F | K | R | I | L | F | L | V | D | R | R | S | L | G | E | Q | A | L | G | A | F | E | D | T | R | I | N |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
| . |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | F | K | L | T | N | A | Q | K | R | A | H | Q | E | I | R | N | D | M | I | S | E | K | P | M | N | R | L | L | Q | G | D | V | G | S | G | K | T | V | V | A | Q | L | A | I | L | D | N | Y | E | A | G | . |
. |
F | Q | T | A | F | M | V | P | T | S | I | L | A | I | Q | H | Y | R | R | T | V | E | S | F | S | K |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|
|
|  |  |  |
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | S |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
366 | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
|
. | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . |
  |
  |   |
521 | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | T | F | N | S | I | F | D | I | K | G | L | T | D | K | F | P | . |
. |
. |
. |
. |
. |
. |
E | D | S | T | K | I | H | V | A | T | V | Q | S | L | V | K | R | T | L | Q | S | D | E | P | M | P | V | A | R | Y | D | C | I | V | V | D | E | A | H | R | G | Y | I | L | D | K | E | Q | T | E | G | E | L | Q | F |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
F | N | I | H | V | A | L | L | I | G | A | T | T | P | S | E | K | E | K | I | K | S | G | L | R | N | G | Q | I | D | V | V | I | G | T | H | A | L | I | Q | E | . |
. |
. |
. |
. |
. |
. |
D | V | H | F | K | N | L | G | L | V | I | I | D | E | Q | H | R | F | E | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |
| T | T |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
| S |
|
|
|  |  |  |  |  | S |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
444 | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
  |
  |   |
594 | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | |
|
. | . | 630 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
R | S | Q | L | D | Y | V | S | A | Y | R | R | I | L | D | H | F | D | A | V | K | I | A | L | T | A | T | P | A | L | H | T | V | Q | . |
. |
I | F | G | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |
|   |   | . | . |   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | N | K | G | K | M | V | D | T | L | V | M | S | A | T | P | I | P | R | S | M | A | L | A | F | Y | G | D |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |
| S | S | S | S |
|
|
|  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
511 | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . |
  |