Job Description P08956 Confidence 99.64% Date Thu Jan 5 11:01:43 GMT 2012 Rank 76 Aligned Residues 176 % Identity 20% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.						.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		F	A	D	N	P	G	M	S	E	L	G	L	R	Y	Y	Q	E	D	A	V	R	A	V	E	K	A	I	V	K	G	Q	Q	E	I	L	L	A	M	A	T	G	T	G	K	T	R	T	A	I	A	M	M	F	R	L	I	Q	S	Q	R	F	K	.	.	.	.	.	R	I	L	F	L	V	D	R	R	S	L	G	E
Query Conservation																																																																.	.	.	.	.
Alig confidence																												.	.	.	.	.																																.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		L	K	A	I	K	E	M	G	F	T	N	M	T	E	I	Q	H	K	S	I	R	P	L	L	E	G	.	.	.	.	.	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M
Template Known Secondary structure								T	T			B															T	.	.	.	.	.									T	T	S																	T	T			G	G	G									S	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		Q	A	L	G	A	F	E	D	T	R	I	N	G	D	T	F	N	S	I	F	D	I	K	G	L	T	D	K	F	P	E	.	.	.	D	S	T	K	I	H	V	A	T	V	Q	S	L	V	K	R	T	L	Q	S	D	E	P	M	P	V	A	R	Y	D	C	I	V	V	D	E	A	H	R	G	Y	I	L	D	K	E
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																					.
Template Conservation																																																								.
Template Sequence		Q	T	F	G	V	L	K	E	L	M	T	H	H	V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	.	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	R	I	L	D	V	G	F	E
Template Known Secondary structure											T	T	T			S							S	S	S														S																	.	T	T				T	T								S							T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	G	E	L	Q	F	R	S	Q	L	D	Y	V	S	A	Y	R	R	I	L	D	H	F	D	A	V	K	I	A	L	T	A	T	P	A	L	H	T	V	Q	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	L	K	Q	I	I	K	L	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	Q	T	M	L	F	S	A	T	Q	T	R	K	V	E	D	L
Template Known Secondary structure											S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.														.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions