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Job DescriptionP08956
Confidence99.52%DateThu Jan 5 11:01:43 GMT 2012
Rank93Aligned Residues176
% Identity19%Templatec3berA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   434.....440.........450.........460.........470.........480..... ....490.........500.........510..
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Query Sequence  FADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMM. FRLIQSQRFKRILFLVDRRSLGEQALG
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Template Sequence  CEACDQLGWTKPTKIQIEAIPLALQG. . . . . RDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISE
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   36...40.........50.........60. ........70.........80.........90.........100.........110
 
   513......520.........530........ .540.........550.........560.........570.........580.........
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Query Sequence  AFEDTRINGDTFNSIFDIKGLTDKFP. . . EDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEG
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Template Sequence  QFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG. FNLRALKYLVMDEADRILNMDFETEVD
Template Known Secondary structure  GGGT


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   111........120.........130.........140.........150.........160.. .......170.........180.........
 
   590.........600.........610.........620........
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Query Sequence  ELQFRSQLDYVSAYRRILDHFDAVKIALTATPALHTVQI
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Template Sequence  KILKVIPR. . . . . . . . . . . . . DRKTFLFSATMTKKVQKL
Template Known Secondary structure  SS
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   190....... ..200.........210.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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