Job Description P08956 Confidence 100.00% Date Thu Jan 5 11:01:43 GMT 2012 Rank 3 Aligned Residues 609 % Identity 16% Template c2w74B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein; PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp Resolution 2.74 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	Q	A	E	V	E	A	Q	Q	Q	K	L	V	A	L	N	G	Y	I	A	I	L	E	G	K	Q	Q	E	T	E	A	Q	T	Q	A	R	L	A	A	L	E	A	Q	L	A	E	K	N	A	E	L	A	K	Q	T	E	Q	E	R	K	A	Y	H	K	E	I	T	D	Q	A	I	K	R	T	L	N	L	S	E
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	E	S	D	L	E	R	E	L	I	Q	D	L	R	N	Q	G	Y	E	F	I	S	V	K	S	Q	S	A	M	L	A	N	V	R	E	Q	L	Q	N	L	N	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	F	N	D	S	E	W	R	R	F	T	E	Q	Y	L	D	N	P	S	D	G	I	L	D
Template Known Secondary structure		S	S															T	T								S																	T			.	.	.	.	.	.	.	.	.	.	.	.													T	T			T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	R	F	L	I	D	A	Q	L	R	K	A	G	W	Q	A	D	S	K	T	L	R	F	S	K	G	A	R	P	E	P	G	V	N	K	A	I	A	E	W	P	T	G	K	D	E	T	G	N	Q	G	F	A	D	Y	V	L	F	V	G	L	K	P	I	A	V	V	E	A	K	R	N	N	I	D	V	P	A
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	R	K	I	H	I	D	Y	I	C	D	F	I	F	D	D	E	R	L	E	N	I	Y	L	I	D	K	K	N	L	M	R	N	K	V	Q	I	I	Q	Q	F	.	.	.	.	.	.	.	.	.	.	.	R	Y	D	V	T	I	L	V	N	G	L	P	L	V	Q	I	E	L	K	K	R	G	V	A	I	R	E
Template Known Secondary structure								T									T	T								S			S	S	S	G	G	G	S									.	.	.	.	.	.	.	.	.	.	.									T	T											T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	E	S	Y	R	Y	S	K	C	F	D	N	G	F	L	R	E	T	L	L	E	H	Y	S	P	D	E	V	H	E	A	V	P	E	Y	E	T	S	W	Q	D	T	S	G	K	Q	R	F	K	I	P	F	C	Y	S	T	N	G	R	E	Y	R	A	T	M	K	T	K	S	G	I	W	Y	R	D	V	R	D
Query Conservation
Alig confidence										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		A	F	N	Q	I	S	E	N	.	.	.	.	.	S	L	F	K	Y	L	Q	L	F	V	I	S	N	G	T	D	T	R	Y	F	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	K	R	D	R	N	S	F	D	F	T	M	N	W	A	K	S	D	N	T	L	I	K	D	.	.	.
Template Known Secondary structure									S	.	.	.	.	.	G	G	G	G	G									S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S	T	T		S	G	G	G		B			B		T	T			B			S	.	.	.
Template Predicted Secondary structure										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.										.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.
Query Sequence		T	R	N	M	S	K	A	L	P	E	W	H	R	P	E	E	L	L	E	M	L	G	S	E	P	Q	K	Q	N	Q	W	F	A	D	N	P	G	M	S	E	L	G	L	R	Y	Y	Q	E	D	A	V	R	A	V	E	K	A	I	V	K	G	.	.	.	.	.	.	.	.	.	Q	Q	E	I	L	L	A	M	A	T
Query Conservation																																																															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																									.	.	.	.	.	.	.
Template Sequence		.	.	.	L	K	D	F	T	A	T	C	F	Q	K	H	T	L	L	N	V	L	V	N	Y	S	V	F	.	.	.	.	.	.	.	D	S	S	Q	T	L	L	V	M	R	P	Y	Q	I	A	A	T	E	R	I	L	W	K	I	K	S	S	F	T	A	K	N	W	S	K	P	E	S	G	G	Y	I	W	H	T	T
Template Known Secondary structure		.	.	.								T	T	S											S				.	.	.	.	.	.	.		T	T	S																										T	T			S	S	G	G	G	S							T
Template Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.
Template SS confidence
					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	K	T	R	T	A	I	A	M	M	F	R	L	I	Q	S	Q	R	F	K	R	I	L	F	L	V	D	R	R	S	L	G	E	Q	A	L	G	A	F	E	D	T	R	I	N	G	D	T	F	N	S	I	F	D	I	K	G	L	T	D	K	F	P	E	D	S	T	K	I	H	V	A	T	V	Q	S	L	V
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		G	S	G	K	T	L	T	S	F	K	A	A	R	L	A	T	E	L	D	F	I	D	K	V	F	F	V	V	D	R	K	D	L	D	Y	Q	T	M	K	E	Y	Q	R	F	S	P	D	.	.	S	V	N	G	S	E	N	T	A	G	L	K	R	N	L	D	K	D	D	N	K	I	I	V	T	T	I	Q	K	L	N
Template Known Secondary structure		T	S	S													T	T		T	T										G	G	G											T	T	S	T	T	.	.			S	S	S										T	T		T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.									.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		K	R	T	L	Q	S	D	E	P	M	P	V	A	R	Y	D	C	I	V	V	D	E	A	H	R	G	Y	I	L	D	K	E	Q	T	E	G	E	L	Q	F	R	S	Q	L	D	Y	V	S	A	Y	R	R	I	L	D	H	F	D	A	V	K	I	A	L	T	A	T	P	.	.	.	.	.	.	.	.	A	L	H	T
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	M	K	A	E	S	D	L	P	V	Y	N	Q	Q	V	V	F	I	F	D	E	C	H	R	S	Q	F	G	E	A	Q	K	N	L	K	K	K	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	Y	Q	F	G	F	T	G	T	P	I	F	P	E	N	A	L	G	S	E	T	T
Template Known Secondary structure								S			G	G	G	G	S								S																		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S				G	G	G		T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.																		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	F	G	E	P	V	Y	R	Y	T	Y	R	T	A	V	I	D	G	F	L	I	D	Q	D	P	P	I	Q	I	I	T	R	N	A	Q	E	G	V	Y	L	S	K	G	E	Q	V	E	R	I	S	P	Q	G	E	V	I	N	D	T	L	E	D	D	Q	D	F	E	V	A	D	F	N	R	G	L	V	I	P
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		A	S	V	F	G	R	E	L	H	S	Y	V	I	T	D	A	I	R	D	E	K	V	L	.	.	.	.	K	F	K	V	D	Y	N	D	V	R	P	Q	F	K	S	L	E	T	E	R	I	Q	E	I	T	Q	Y	I	L	N	N	F	R	Q	K	T	H	R	T	F	P	G	S	K	G	F	N	A	M	L	A	V	S
Template Known Secondary structure							S													T	T	S	S		.	.	.	.											T	T	T	T	T	T	T																				T			S	T	T											S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.					.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	N	R	A	V	C	N	E	L	T	N	Y	L	D	P	T	G	S	Q	K	T	L	V	F	C	V	T	N	A	H	A	D	M	V	V	E	E	L	R	A	A	F	K	K	K	Y	P	Q	L	E	H	D	A	I	I	K	I	T	G	D	A	D	K	D	A	R	K	V	Q	T	M	I	T	R	F	N	K	E	R
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		S	V	D	A	A	K	A	.	.	.	.	Y	Y	A	T	F	K	P	L	R	I	A	T	I	F	S	F	A	G	E	I	S	D	E	T	F	D	T	A	K	E	F	L	D	A	A	I	R	E	Y	N	S	H	F	K	T	N	F	S	T	D	S	N	G	F	Q	N	Y	Y	R	D	L	A	Q	R	V	K	N	Q	D
Template Known Secondary structure		S							.	.	.	.																									S																			T					S	S																	T	T	S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		546	.	.	.	550	.	.					.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	N	I	V	V	T	V	D	L	L	T	T	G	V	D	I	P	S	I	C	N	I	V	F	L	R	K	V	R	S	R	I	L	Y	E	Q	M	K	G	R	A	T	R	L	C	P	E	V	N	K	T	S	F	K	I	F	D	C	V	D	I	Y	S	T	L	E	S	V	D	T	M	R	P
Query Conservation
Alig confidence		.																																		.														.
Template Conservation		.																																		.														.
Template Sequence		.	I	D	L	L	I	V	V	G	M	F	L	T	G	F	D	A	P	T	L	N	T	L	F	V	D	K	N	L	R	Y	H	G	L	.	M	Q	A	F	S	R	T	N	R	I	Y	D	A	.	T	K	T	F	G	N	I	V	T	F	R	D	L	E	R	S	T	I	D	A	I	T	L	F	G
Template Known Secondary structure		.	S	S					S	S	T	T	S	S	S				T	T								S								.					G	G	G						T	.	T			S						S	S													T	S
Template Predicted Secondary structure		.																																		.														.
Template SS confidence
			650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.	.	690	.	.	.	.	.		.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720