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Job Description | P08956 | Confidence | 95.95% | Date | Thu Jan 5 11:01:43 GMT 2012 |
Rank | 199 | Aligned Residues | 86 |
% Identity | 21% | Template | c2r2aB_ |
PDB info |
PDB header:toxin | Chain: B: PDB Molecule:uncharacterized protein; |
PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis
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Resolution | 1.82 Å |
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467 | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
I | L | L | A | M | A | T | G | T | G | K | T | R | T | A | I | A | M | M | F | R | L | I | . |
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Q | S | Q | R | F | K | R | I | L | F | L | V | D | R | R | S | L | G | E | Q | A | L | G | A | F | E | D | T | R | I | N | G | D | T | F | N | S | I | F | D | I | K | G | L | T | D | K | F | P | E | D | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | L | I | T | G | T | P | G | S | G | K | T | L | K | X | V | S | X | X | A | N | D | E | X | F | K | P | D | E | N | G | I | R | R | K | V | . |
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F | T | N | I | K | G | L | K | I | P | H | T | Y | I | E | T | D | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
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. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
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542 | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | K | I | H | V | A | T | V | Q | S | L | V | K | R | T | L | Q | S | D | E | P | M | P | V | A | R | Y | D | C | I | V | V | D | E | A | H | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | K | L | P | K | S | T | D | E | Q | L | S | A | H | D | X | Y | E | W | I | K | K | P | E | N | I | G | S | I | V | I | V | D | E | A | Q | D |
Template Known Secondary structure |   |
T | T |
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| B | G | G | G |  |  |  |  | T | T | S | G | G | G | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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