Return to main results Retrieve Phyre Job Id

Job DescriptionP08956
Confidence94.06%DateThu Jan 5 11:01:43 GMT 2012
Rank258Aligned Residues40
% Identity20%Templatec1sxjE_
PDB info PDB header:replicationChain: E: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   449450.........460.... .....470.........480........
Predicted Secondary structure 

..







Query SS confidence 















. .























Query Sequence  QEDAVRAVEKAIVKGQ. . QEILLAMATGTGKTRTAIAMMFRL
Query Conservation 
  

  
        ..
  

 







 


 

  
Alig confidence 















..























Template Conservation         
   
        


 



 


 

  

  
Template Sequence  NEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI
Template Known Secondary structure 
TTTT
TT




STTSST
Template Predicted Secondary structure 












Template SS confidence 









































   1920.........30.........40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions