Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACH1
Confidence71.40%DateThu Jan 5 11:18:10 GMT 2012
Rank117Aligned Residues48
% Identity19%Templatec3hugA_
PDB info PDB header:transcription/membrane proteinChain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60
Predicted Secondary structure 












Query SS confidence 
















































Query Sequence  DIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD
Query Conservation   


 
 


 


 


  


 


  

 

  
 

 

 



 
Alig confidence 












































.


Template Conservation   
  
      
  


  
 

  

   
 

   

  
   .

 
Template Sequence  AVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQEL. GVT
Template Known Secondary structure  TS


TS
.TS
Template Predicted Secondary structure 





.


Template SS confidence 
















































   129130.........140.........150.........160.........170... ...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions