Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACH1
Confidence94.82%DateThu Jan 5 11:18:10 GMT 2012
Rank53Aligned Residues39
% Identity23%Templatec2l8nA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional repressor cytr; PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40..... ....50.. .......60.
Predicted Secondary structure 





....
..


Query SS confidence 






















. . . .






. .








Query Sequence  SMAAESRRNGLSSSTLANALSRP. . . . WPKGEMI. . IAKALGTDP
Query Conservation 


 


  


 


  

 

....  
 

 ..

 



 
Alig confidence 






















....






..








Template Conservation 

 


   


  






    

  

 

   
  


 
Template Sequence  TMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLP
Template Known Secondary structure 
TT

TTT



S




Template Predicted Secondary structure 













Template SS confidence 












































   11........20.........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions