Job Description P77790 Confidence 94.86% Date Thu Jan 5 12:32:53 GMT 2012 Rank 7 Aligned Residues 62 % Identity 19% Template c3m1nB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:sonic hedgehog protein; PDBTitle: crystal structure of human sonic hedgehog n-terminal domain Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	L	H	K	D	A	I	T	A	L	A	K	S	I	S	I	A	Q	L	.	.	S	G	L	Q	L	V	I	Y	D	A	Y	R	P	Q	Q	A	Q	A	M	L	W	Q	A	C	P	D	P	Q	Y	V	V	D	V	T	V	G	S	N	H	S	R	G	T	A	I	D	L	T	L	R	D	E	H	G	N	I	L	D	M
Query Conservation																					.	.
Alig confidence																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	T	Q	R	C	K	D	K	L	N	A	L	A	I	S	V	M	N	Q	W	P	G	V	K	L	R	V	T	E	G	W	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	H	H	S	E	E	S	L	H	Y	E	G	R	A	V	D	I	T	T	S	D	R	D	R	S	K	Y	G	M
Template Known Secondary structure																						S	T	T									S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S		S	S		G	G	G	G	T								T	T			G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions