Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 4 Aligned Residues 258 % Identity 25% Template d1uf5a_ SCOP info Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase Carbamilase Resolution 1.60

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.	.	.																																								.	.	.	.	.	.
Query SS confidence												.	.	.																																								.	.	.	.	.	.
Query Sequence		M	L	V	A	A	G	Q	F	A	V	.	.	.	T	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	.	.	.	.	.	.	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E
Query Conservation												.	.	.																																								.	.	.	.	.	.
Alig confidence												.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	L	A	V	G	Q	Q	G	P	I	A	R	A	E	T	R	E	Q	V	V	V	R	L	L	D	M	L	T	K	A	A	S	R	G	A	N	F	I	V	F	P	E	L	A	L	T	T	F	F	P	R	W	H	F	T	D	E	A	E	L	D	S	F	Y	E	T	E	M	P	G	P	V	V	R	P	L	F	E	K
Template Known Secondary structure									B					T	T																				T	T		S						T	T	T	T	S			G	G	G	S										T	T	S	B	S	S	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.														.																						.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.														.																						.	.	.	.	.	.	.	.
Query Sequence		S	K	R	N	M	M	T	T	I	L	T	I	H	V	P	.	.	.	S	T	P	G	R	A	W	N	M	L	V	A	L	.	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	.	.	.	.	.	.	.	.	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G
Query Conservation																	.	.	.														.																						.	.	.	.	.	.	.	.
Alig confidence																	.	.	.														.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	E	L	G	I	G	F	N	L	G	Y	A	E	L	V	V	E	G	G	V	K	R	R	F	N	T	S	I	L	V	D	K	S	G	K	I	V	G	K	Y	R	K	I	H	L	P	G	H	K	E	Y	E	A	Y	R	P	F	Q	H	L	E	K	R	Y	F	E	P	G	D	L	G	F	P	V	Y	D	V	D	A
Template Known Secondary structure						T														T	T													T	T	S													S		S	S			T	T		S	S												S	S		S						T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		M	K	V	G	L	M	T	C	Y	D	L	R	F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	.	.	.	.	.	.	.	.	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		A	K	M	G	M	F	I	A	N	D	R	R	W	P	E	A	W	R	V	M	G	L	R	G	A	E	I	I	C	G	G	Y	N	T	P	T	H	N	P	P	V	P	Q	H	D	H	L	T	S	F	H	H	L	L	S	M	Q	A	G	S	Y	Q	N	G	A	W	S	A	A	A	G	K	A	G	M	E	E	N	C	M
Template Known Secondary structure									G	G	G	G	G											T	T		S									B	S			T	T		G	G	G	G	G	G																	T								B					T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																					.																									.
Query SS confidence																					.																									.
Query Sequence		N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I	A	A	A	S	.	E	M	P	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	.	L	N	N	R	R	F	A	P	P	Q	L
Query Conservation																					.																									.
Alig confidence																					.																									.						.	.	.
Template Conservation																																																				.	.	.
Template Sequence		L	L	G	H	S	C	I	V	A	P	T	G	E	I	V	A	L	T	T	T	L	E	D	E	V	I	T	A	A	V	D	L	D	R	C	R	E	L	R	E	H	I	F	N	F	K	Q	H	R	Q	.	.	.	P	Q	H
Template Known Secondary structure											T	T	S								S	S	S	S									G	G	G	G					T	T	T	T								.	.	.	G	G	G
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions