Job Description P39874 Confidence 38.04% Date Thu Jan 5 12:01:07 GMT 2012 Rank 36 Aligned Residues 52 % Identity 12% Template c3o3cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glycogen synthase basal state udp complex Resolution 3.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	Y	D	L	R	F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G
Query Conservation
Alig confidence																														.	.										.	.	.	.	.	.
Template Conservation																														.	.										.	.	.	.	.	.
Template Sequence		L	N	A	N	N	P	I	L	G	L	D	Y	D	E	F	V	R	G	C	H	L	G	V	F	P	S	Y	Y	.	.	E	P	W	G	Y	T	P	A	E	.	.	.	.	.	.	C	T	V	M	G	V	P	S	I	T	T	N	V	S	G
Template Known Secondary structure				T	T		S	S												S	S							S	S	.	.	B	S	S							.	.	.	.	.	.				T	T							S	S	B
Template Predicted Secondary structure																														.	.										.	.	.	.	.	.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.	510	.	.	.	.	.	.	.							.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions