Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 13 Aligned Residues 238 % Identity 22% Template c3n05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.
Predicted Secondary structure													.																																																																.	.	.
Query SS confidence													.																																																																.	.	.
Query Sequence		M	L	V	A	A	G	Q	F	A	V	T	.	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K	R	.	.	.	N	M
Query Conservation													.																																																																.	.	.
Alig confidence													.																																																																.	.	.
Template Conservation
Template Sequence		L	R	L	A	L	N	Q	I	D	S	T	V	G	D	I	A	G	N	A	E	A	I	L	R	W	T	R	H	S	A	E	Q	G	A	H	L	V	A	F	P	E	M	A	L	T	G	Y	P	V	E	D	L	A	L	R	S	S	F	V	E	A	S	R	T	A	L	R	E	L	A	A	R	L	A	E	E	G	F	G	E
Template Known Secondary structure													T	T																		T	T	T		S						T	T	T	T	T		S			G	G	G	G	G																						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		M	T	T	I	L	T	I	H	V	P	S	.	.	.	.	.	.	.	.	.	T	P	G	R	A	W	N	M	L	V	A	L	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G	M	K	V	G	L	M	T	C
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																													.
Template Conservation																																																																		.
Template Sequence		L	P	V	L	V	G	Y	L	D	R	S	E	S	A	Q	P	K	Y	G	Q	P	A	G	A	P	R	N	A	A	A	V	L	H	R	G	R	V	A	L	T	F	A	K	H	H	L	P	N	Y	G	V	F	D	E	F	R	Y	F	V	P	G	D	T	M	.	P	I	V	R	L	H	G	V	D	I	A	L	A	I	C
Template Known Secondary structure		S											S	S		B	T	T	T	T	B		T	T											T	T													S	S	S	S														.						T	T								G
Template Predicted Secondary structure																																																																		.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		148	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure								.																																																							.	.	.	.
Query SS confidence								.																																																							.	.	.	.
Query Sequence		Y	D	L	R	F	P	.	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I
Query Conservation								.																																																							.	.	.	.
Alig confidence								.																																																							.	.	.	.
Template Conservation
Template Sequence		E	D	L	W	Q	D	G	G	R	V	P	A	A	R	S	A	G	A	G	L	L	L	S	V	N	A	S	P	Y	E	R	D	K	D	D	T	R	L	E	L	V	R	K	R	A	Q	E	A	G	C	T	T	A	Y	L	A	M	I	G	G	Q	D	E	L	V	F	D	G	D	S	I	V	V	D	R	D	G	E	V	V
Template Known Secondary structure		G	G	G	G	S	T	T	S							T	T	T		S									B					S	S															T	S												T	T					B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		223	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	A	A	S	.	E	M	P	A	L	I	M	A	E	V	T	P	E
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	R	A	P	Q	F	S	E	G	C	V	V	L	D	L	D	L	P
Template Known Secondary structure						B	S	S										B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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