Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 14 Aligned Residues 238 % Identity 16% Template c3ilvA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii Resolution 1.79 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.
Predicted Secondary structure													.																																																																	.
Query SS confidence													.																																																																	.
Query Sequence		M	L	V	A	A	G	Q	F	A	V	T	.	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K	R	N	.	M	M	T
Query Conservation													.																																																																	.
Alig confidence													.																																																	.	.	.														.
Template Conservation																																																														.	.	.
Template Sequence		I	R	I	G	G	A	A	V	N	Q	T	P	I	D	W	E	N	N	V	K	N	I	L	D	A	I	E	E	A	K	N	A	N	V	E	I	L	C	L	P	E	L	C	I	T	G	Y	G	C	E	D	L	F	L	T	D	W	V	A	E	.	.	.	T	A	I	E	Y	C	F	E	I	A	A	S	C	T	D	I	T
Template Known Secondary structure													T	T																			T	T		S						T	T	T	T	T		S			G	G	G	G	G	S						.	.	.											T	T		T	T	S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	L	T	I	H	V	P	S	T	P	G	R	A	W	N	M	L	V	A	L	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	V	E	G	M	K	V	G
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		V	S	L	G	L	P	X	R	I	A	G	I	T	Y	.	N	C	V	C	L	V	E	N	G	I	V	K	G	F	S	A	K	Q	F	L	A	N	E	G	V	H	Y	E	T	R	W	F	T	A	W	P	R	N	H	T	T	T	F	L	Y	N	D	V	K	Y	P	F	G	D	V	L	Y	N	V	K	D	A	R	I	G
Template Known Secondary structure											T	T				.								T	T									S	S				S	T	T			G	G	G	T						T	T								T	T							S						T	T
Template Predicted Secondary structure																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		L	M	T	C	Y	D	L	R	F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	N	I	G	Q	S	R	I	I	D	P	F	G
Query Conservation																																																																		.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		F	E	I	C	E	D	H	Y	E	K	.	.	.	.	.	.	.	.	.	G	A	T	L	V	L	N	P	S	A	S	H	F	A	F	G	K	S	A	I	R	Y	D	L	V	I	G	G	S	E	R	F	D	C	T	Y	V	Y	A	N	L	L	G	N	E	A	G	R	X	I	Y	D	G	E	V	L	I	A	H	K	G
Template Known Secondary structure					T	T			G	G	G	.	.	.	.	.	.	.	.	.	T		S									B			T	T																T	T	S											S	S	S	S												T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		V	T	I	A	A	A	S	.	.	E	M	P	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	L
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		K	L	I	Q	R	N	D	R	L	S	F	K	N	V	N	L	I	Y	A	D	I	A	T	L	E	K	E	F	E	F	W	E	A	T
Template Known Secondary structure									S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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