Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 12 Aligned Residues 241 % Identity 24% Template c3hkxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. Resolution 1.66 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	L	V	A	A	G	Q	F	A	V	T	.	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K	R	N	M	M	T	T
Query Conservation													.
Alig confidence													.																																														.
Template Conservation																																																											.
Template Sequence		M	R	I	A	L	M	Q	H	T	A	R	P	L	D	P	Q	H	N	L	D	L	I	D	D	A	A	A	R	A	S	E	Q	G	A	Q	L	L	L	T	P	E	L	F	G	F	G	Y	V	P	S	Q	I	C	A	Q	V	S	.	A	E	Q	V	D	A	A	R	S	R	L	R	G	I	A	R	D	R	G	I	A	L
Template Known Secondary structure									B				T	T																			T	T		S						T	T	G	G	G		S											.																		T	T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	L	T	I	H	V	P	S	T	P	G	R	A	W	N	M	L	V	A	L	.	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G	M	K	V	G	L	M	T	C	Y	D	L	R	F	P	E	L	A	L	A
Query Conservation																						.
Alig confidence																						.																			.	.	.
Template Conservation																																									.	.	.
Template Sequence		V	W	S	L	P	G	P	E	G	P	E	Q	R	G	I	T	A	E	L	A	D	E	H	G	E	V	L	A	S	Y	Q	K	V	Q	L	Y	G	P	E	.	.	.	E	K	A	A	F	V	P	G	E	Q	P	P	P	V	L	S	W	G	G	R	Q	L	S	L	L	V	C	Y	D	V	E	F	P	E	M	V	R	A
Template Known Secondary structure						B		S	S		T	T	T			B							T	T	S									S	S						.	.	.					S					S								T	T								G	G	G	G	G	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I	A	A	A	S	E	M	P	A	L	I	M	A
Query Conservation																																																			.	.	.	.
Alig confidence																						.	.																												.	.	.	.
Template Conservation																						.	.
Template Sequence		A	A	A	R	G	A	Q	L	V	L	V	P	T	A	L	A	G	D	E	T	.	.	S	V	P	G	I	L	L	P	A	R	A	V	E	N	G	I	T	L	A	Y	A	N	H	C	G	P	E	G	G	L	V	F	D	G	G	S	V	V	V	G	P	A	G	Q	P	L	G	E	L	G	V	E	P	G	L	L	V	V
Template Known Secondary structure					T	T		S									B	S			T	.	.					T										T								B					T	T												T	T	S								S	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	P	E	R	V	R	Q	V	R	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	D	D	Y	L	Q	D	R	R	A	E
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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