Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 8 Aligned Residues 254 % Identity 19% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	L	V	A	A	G	Q	F	A	V	T	.	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K	R	N	M	M	T	T
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		V	R	V	A	A	C	T	H	H	T	T	I	G	D	P	A	A	N	A	A	S	V	L	D	M	A	R	A	C	H	D	D	G	A	A	L	A	V	F	P	E	L	T	L	S	G	Y	S	I	E	D	V	L	L	Q	D	S	L	L	D	A	V	E	D	A	L	L	D	L	V	T	E	S	A	D	L	L	P	V	L
Template Known Secondary structure													T	T																			T	T		S						T	T	T	T	T		T	T		G	G	G	G	G																			G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																			.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	T	I	H	V	P	S	T	P	G	R	A	W	N	M	L	V	A	L	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	L	L	E	V	E	G	M	K
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		V	V	G	A	P	L	R	H	R	H	R	I	Y	.	N	T	A	V	V	I	H	R	G	A	V	L	G	V	V	P	K	S	Y	L	P	T	Y	R	E	F	Y	E	R	R	Q	M	A	P	G	D	G	E	R	G	T	I	R	I	G	G	A	D	V	A	F	G	T	D	L	L	F	A	A	S	D	L	P	G	F	V
Template Known Secondary structure										T	T				.								T	T									S						T	T								B			T	T			S					T	T						S	S	S						T	T		T	T
Template Predicted Secondary structure															.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		142	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.
Predicted Secondary structure															.																																																						.	.	.	.	.
Query SS confidence															.																																																						.	.	.	.	.
Query Sequence		V	G	L	M	T	C	Y	D	L	R	F	P	E	.	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	.	N	I	G	Q	S	R	I	I
Query Conservation															.																																																						.	.	.	.	.
Alig confidence															.																																																						.	.	.	.	.
Template Conservation
Template Sequence		L	H	V	E	I	C	E	D	M	F	V	P	M	P	P	S	A	E	A	A	L	A	G	A	T	V	L	A	N	L	S	G	S	P	I	T	I	G	R	A	E	D	R	R	L	L	A	R	S	A	S	A	R	C	L	A	A	Y	V	Y	A	A	A	G	E	G	E	S	T	T	D	L	A	W	D	G	Q	T	M	I
Template Known Secondary structure							G	G	G	G	S	S	S	S										T												B		T	T																T	T	S									T	T	S			S	S		B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		216	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		D	P	F	G	V	T	I	A	A	A	S	.	.	.	E	M	P	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	L	N	N	R	R
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		W	E	N	G	A	L	L	A	E	S	E	R	F	P	K	G	V	R	R	S	V	A	D	V	D	T	E	L	L	R	S	E	R	L	R	M	G	T	F	D	D	N	R
Template Known Secondary structure				T	T								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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