Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 2 Aligned Residues 257 % Identity 23% Template c2vhiG_ PDB info PDB header:hydrolase Chain: G: PDB Molecule:cg3027-pa; PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster Resolution 3.30 Å

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		1	.	.	.	.	.	.								.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.					.																																						.	.	.													.
Query SS confidence									.	.	.	.	.	.	.					.																																						.	.	.													.
Query Sequence		M	L	V	A	A	G	Q	.	.	.	.	.	.	.	F	A	V	T	.	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	.	.	.	D	A	D	L	S	V	K	S	A	Q	L	L	.	E	G	E	F	L	G	R	L
Query Conservation									.	.	.	.	.	.	.					.																																						.	.	.													.
Alig confidence									.	.	.	.	.	.	.					.																																						.	.	.													.
Template Conservation
Template Sequence		V	R	V	G	A	I	Q	N	S	I	V	I	P	T	T	A	P	I	E	K	Q	R	E	A	I	W	N	K	V	K	T	M	I	K	A	A	A	E	A	G	C	N	I	V	C	T	Q	E	A	W	T	M	P	F	A	F	C	T	R	E	K	F	P	W	C	E	F	A	E	E	A	E	N	G	P	T	T	K	M	L
Template Known Secondary structure													S		S	S	S																							T	T		S						T	T	T	T	S			G	G	G	T				T	T	G	G	G	G		B		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		R	R	E	S	K	R	N	M	M	T	T	I	L	T	I	H	V	P	S	.	.	.	T	P	G	R	A	W	N	M	L	V	A	L	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G	M	K	V	G	L	M
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		A	E	L	A	K	A	Y	N	M	V	I	I	H	S	I	L	E	R	D	M	E	H	G	E	T	I	W	N	T	A	V	V	I	S	N	S	G	R	Y	L	G	K	H	R	K	N	H	I	P	R	V	G	D	F	N	E	S	T	Y	Y	M	E	G	N	T	G	H	P	V	F	E	T	E	F	G	K	L	A	V	N
Template Known Secondary structure									T												S	T	T	T	T											T	T	S	S								S	S				S	T	T			G	G	G	T						S								T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	Y	D	L	R	F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		I	C	Y	G	R	H	H	P	Q	N	W	M	M	F	G	L	N	G	A	E	I	V	F	N	P	S	A	T	I	G	R	L	S	.	E	P	L	W	S	I	E	A	R	N	A	A	I	A	N	S	Y	F	T	V	P	I	N	R	V	G	T	E	Q	F	P	N	E	Y	T	S	G	D	G	N	K	A	H	K	E	F
Template Known Secondary structure			G	G	G	G	G											T	T		S									B	S	T	T	T	.	S	T	T	T	T	T										T	S																				S	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
				208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.																				.
Query SS confidence		.	.																				.
Query Sequence		.	.	N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I	A	A	A	S	.	E	M	P	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	L	N	N	R	R	F	A	P	P	Q	L
Query Conservation		.	.																				.
Alig confidence		.	.																				.																														.	.	.
Template Conservation																																																					.	.	.
Template Sequence		G	P	F	Y	G	S	S	Y	V	A	A	P	D	G	S	R	T	P	S	L	S	R	D	K	D	G	L	L	V	V	E	L	D	L	N	L	C	R	Q	V	K	D	F	W	G	F	R	M	T	Q	R	.	.	.	V	P	L
Template Known Secondary structure											B		T	T	S		B						S	S	S										T	T											T	T	T	T			.	.	.
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions