Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 6 Aligned Residues 246 % Identity 21% Template c2plqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aliphatic amidase; PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.	.	.	.	.																							.	.
Query SS confidence											.	.	.	.	.																							.	.
Query Sequence		M	L	V	A	A	G	Q	F	A	.	.	.	.	.	V	T	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	.	.	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K
Query Conservation											.	.	.	.	.																							.	.
Alig confidence											.	.	.	.	.																							.	.
Template Conservation
Template Sequence		V	G	I	A	V	V	N	Y	K	M	P	R	L	H	T	K	A	E	V	I	E	N	A	K	K	I	A	D	M	V	V	G	M	K	Q	G	L	P	G	M	D	L	V	V	F	P	E	Y	S	T	M	G	I	M	Y	D	Q	D	E	M	F	A	T	A	A	S	I	P	G	E	E	T	A	I	F	A	E	A	C	K
Template Known Secondary structure										B						S																							T	T								T	T	T	T	T					S									B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		74	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																.
Query SS confidence													.	.	.	.																.
Query Sequence		R	N	M	M	T	T	I	L	T	I	H	.	.	.	.	V	P	S	T	P	G	R	A	W	N	M	L	V	A	L	.	Q	A	G	N	I	V	A	R	Y	A	K	L	H	L	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G	M	K	V	G	L	M	T	C	Y
Query Conservation													.	.	.	.																.
Alig confidence													.	.	.	.																.																					.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		K	A	D	T	W	G	V	F	S	L	T	G	E	K	H	E	D	H	P	N	K	A	P	Y	N	T	L	V	L	I	N	N	K	G	E	I	V	Q	K	Y	R	K	I	I	P	W	C	P	I	E	G	.	.	.	.	.	W	Y	P	G	D	T	T	Y	V	T	E	G	P	K	G	L	K	I	S	L	I	V	C	D
Template Known Secondary structure				T													T	T	T	T	S	S											T	T	S									S	S			T	T	T			.	.	.	.	.		B											G	G	G								G	G
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		D	L	R	F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I	A	A
Query Conservation																																																													.	.	.	.
Alig confidence																													.	.																															.	.	.	.
Template Conservation																													.	.
Template Sequence		D	G	N	Y	P	E	I	W	R	D	C	A	M	K	G	A	E	L	I	V	R	C	Q	G	Y	M	Y	.	.	P	A	K	E	Q	Q	I	M	M	A	K	A	M	A	W	A	N	N	T	Y	V	A	V	A	N	A	T	G	F	D	G	V	Y	S	Y	F	G	H	S	A	I	I	G	F	D	G	R	T	L	G	E
Template Known Secondary structure		G	G	G	S										T	T		S									B	T	.	.	T																T	T													S	S												T	T	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		225	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	S	E	M	P	.	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	L	N	N
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		C	G	T	E	E	N	G	I	Q	Y	A	E	V	S	I	S	Q	I	R	D	F	R	K	N	A	Q	S	Q	N	H
Template Known Secondary structure				S		T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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