Job Description P39874 Confidence 40.74% Date Thu Jan 5 12:01:07 GMT 2012 Rank 33 Aligned Residues 35 % Identity 17% Template c2ei9A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein; PDBTitle: crystal structure of r1bm endonuclease domain Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	A	G	Q	F	A	V	T	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		R	L	R	I	G	Q	I	N	L	G	G	A	E	.	.	.	.	D	A	T	R	E	L	P	S	I	A	R	D	L	G	L	D	I	V	L	V	Q	E
Template Known Secondary structure											T	T			.	.	.	.					T									T		S						S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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