Job Description P39874 Confidence 100.00% Date Thu Jan 5 12:01:07 GMT 2012 Rank 1 Aligned Residues 256 % Identity 30% Template c1emsB_ PDB info PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	A	A	G	Q	F	A	V	T	S	V	W	E	K	N	A	E	I	C	A	S	L	M	A	Q	A	A	E	N	D	A	S	L	F	A	L	P	E	A	L	L	A	R	D	D	H	D	A	D	L	S	V	K	S	A	Q	L	L	E	G	E	F	L	G	R	L	R	R	E	S	K	R	N	M	M	T	T	I
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		H	F	I	A	V	C	Q	M	T	S	D	N	D	L	E	K	N	F	Q	A	A	K	N	M	I	E	R	A	G	E	K	K	C	E	M	V	F	L	P	E	C	F	D	F	I	G	L	N	.	K	N	E	Q	I	D	L	A	M	A	T	D	C	E	Y	M	E	K	Y	R	E	L	A	R	K	H	N	I	W	L	S
Template Known Secondary structure									B				S																			T	T		S							T		S				S	S	.	T	T	T	T	T	T	S		B		S	S	S													T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure										.	.	.													.														.	.	.	.	.
Query SS confidence										.	.	.													.														.	.	.	.	.
Query Sequence		L	T	I	H	V	P	S	T	.	.	.	P	G	R	A	W	N	M	L	V	A	L	Q	.	A	G	N	I	V	A	R	Y	A	K	L	H	L	.	.	.	.	.	Y	D	A	F	A	I	Q	E	S	R	R	V	D	A	G	N	E	I	A	P	L	L	E	V	E	G	M	K	V	G	L	M	T	C	Y	D	L	R
Query Conservation										.	.	.													.														.	.	.	.	.
Alig confidence										.	.	.													.														.	.	.	.	.
Template Conservation
Template Sequence		L	G	G	L	H	H	K	D	P	S	D	A	A	H	P	W	N	T	H	L	I	I	D	S	D	G	V	T	R	A	E	Y	N	K	L	H	L	F	D	L	E	I	P	G	K	V	R	L	M	E	S	E	F	S	K	A	G	T	E	M	I	P	P	V	D	T	P	I	G	R	L	G	L	S	I	C	Y	D	V	R
Template Known Secondary structure										S	S		T	T	S										S	S	S																	T	T	T										B				S								T	T								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		F	P	E	L	A	L	A	Q	A	L	Q	G	A	E	I	L	V	L	P	A	A	W	V	R	G	P	L	K	E	H	H	W	S	T	L	L	A	A	R	A	L	D	T	T	C	Y	M	V	A	A	G	E	C	G	N	K	.	.	.	.	.	N	I	G	Q	S	R	I	I	D	P	F	G	V	T	I	A	A	A	S
Query Conservation																																																										.	.	.	.	.
Alig confidence																														.																												.	.	.	.	.
Template Conservation																														.
Template Sequence		F	P	E	L	S	L	W	N	R	K	R	G	A	Q	L	L	S	F	P	S	A	F	T	L	N	T	G	L	.	A	H	W	E	T	L	L	R	A	R	A	I	E	N	Q	C	Y	V	V	A	A	A	Q	T	G	A	H	N	P	K	R	Q	S	Y	G	H	S	M	V	V	D	P	W	G	A	V	V	A	Q	C	S
Template Known Secondary structure												T	T		S						B			B						.															T							B	B						T	T												T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	P	A	L	I	M	A	E	V	T	P	E	R	V	R	Q	V	R	A	Q	L	P	V	L	N	N	R	R	F	A	P	P	Q	L
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		E	R	V	D	M	C	F	A	E	I	D	L	S	Y	V	D	T	L	R	E	M	Q	P	V	F	S	H	R	R	.	.	.	S	D	L
Template Known Secondary structure		S	S	S																					G	G	G	S			.	.	.	T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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