Job Description P75811 Confidence 99.87% Date Thu Jan 5 12:14:28 GMT 2012 Rank 20 Aligned Residues 176 % Identity 13% Template c3on2C_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: structure of a protein with unknown function from rhodococcus sp. rha1 Resolution 1.96 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		R	R	A	N	D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	.	S	D	V	S	D
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		Q	P	Y	H	H	G	S	L	R	R	V	L	L	A	R	A	E	S	T	L	E	K	D	G	V	D	G	L	S	L	R	Q	L	A	R	E	A	G	V	S	H	A	A	P	S	K	H	F	R	D	R	Q	A	L	L	D	A	L	A	E	S	G	F	L	R	L	T	A	A	L	E	R	A	V	E	E	A	E	S	H
Template Known Secondary structure			T	T	S																				T	G	G	G										T	T			S	S	S				S	S	S	S																											S		S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		A	P	G	A	C	Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	.	.	.	.	.	.	.	.	.	Q	W	F	E	P	G	T	A	R	A	L	D	A	F	I	E
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	R	F	A	A	L	A	G	A	Y	V	S	F	A	L	A	H	R	E	L	L	A	L	X	Y	G	N	K	H	A	P	G	A	A	S	Q	V	V	E	A	G	H	A	S	X	D	L	T	V	R	I	V	T	E	A	Q	A	A	G	D	I	G	P	G	D	A	S	R	I	A	L	V	A	F	A	T	F	H
Template Known Secondary structure																				S													S	T	T																										T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	M	T	L	H	F	V	T	D	R	.	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		G	I	A	T	L	A	A	G	G	X	L	D	G	A	P	V	D	E	V	V	T	A	A	S	D	T	F
Template Known Secondary structure									T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions