Job Description P75811 Confidence 99.84% Date Thu Jan 5 12:14:28 GMT 2012 Rank 46 Aligned Residues 166 % Identity 16% Template c3cjdB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution Resolution 1.79 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A	C	Q	A
Query Conservation
Alig confidence																																																																			.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		A	L	R	E	K	L	I	D	L	A	E	A	Q	I	E	A	E	G	L	A	S	L	R	A	R	E	L	A	R	Q	A	D	C	A	V	G	A	I	Y	T	H	F	Q	D	L	N	A	L	T	L	E	V	N	G	R	T	F	A	R	L	G	A	A	V	G	.	.	.	.	A	V	D	H	P	N	E	R	L	I	A
Template Known Secondary structure																				G	G	G											T	S									S	S	S																						.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																									.	.	.	.	.	.	.
Query SS confidence																														.	.																									.	.	.	.	.	.	.
Query Sequence		I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	.	.	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	W	F	E	.	.	.	.	.	.	.	P	G	T	A	R	A	L	D	A	F	I	E	G	M	T	L	H	F	V
Query Conservation																														.	.																									.	.	.	.	.	.	.
Alig confidence																														.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	S	H	A	Y	L	A	F	A	R	E	H	P	K	L	W	R	A	L	F	D	V	E	X	R	S	D	G	P	V	P	Q	W	Y	G	H	A	X	A	Q	L	F	S	Y	I	T	T	P	L	A	K	I	F	P	E	S	D	D	A	E	L	D	L	X	T	R	T	L	F	S	S	V	H	G	I	V	L	L	G	L
Template Known Secondary structure													S										S	S			S	S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		159	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		T	D	R	.	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		E	N	R	I	S	G	V	P	G	E	Q	L	K	T	X	I	R	L	L	L
Template Known Secondary structure		T	T		T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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