Job Description P75811 Confidence 99.86% Date Thu Jan 5 12:14:28 GMT 2012 Rank 31 Aligned Residues 171 % Identity 9% Template c3ccyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822 Resolution 2.01 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	I	R	D	T	I	I	E	R	A	A	A	X	F	A	R	Q	G	Y	S	E	T	S	I	G	D	I	A	R	A	C	E	C	S	K	S	R	L	Y	H	Y	F	D	S	K	E	A	V	L	R	D	X	L	T	T	H	V	D	S	L	L	E	R	C	R	Q	V	L	Y	G	S	N	E	P	K	T	R	F	L
Template Known Secondary structure		T	T																T		T	T	T	S									T	T			G	G	G	G	T	T	T		S																										T	T		S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.
Predicted Secondary structure																															.	.																					.	.	.	.	.																					.	.	.
Query SS confidence																															.	.																					.	.	.	.	.																					.	.	.
Query Sequence		A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	.	.	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	.	.	.	.	.	Q	W	F	E	P	G	T	A	R	A	L	D	A	F	I	E	G	M	T	L	.	.	.	H
Query Conservation																															.	.																					.	.	.	.	.																					.	.	.
Alig confidence																															.	.																					.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		Q	I	V	K	L	F	L	E	I	Y	A	T	S	R	D	R	H	V	V	X	L	T	C	L	D	A	L	P	E	D	Q	R	K	A	L	I	A	K	Q	R	E	L	I	A	Y	V	R	D	A	L	L	Q	L	R	P	D	X	A	A	N	R	T	L	A	H	V	D	T	X	L	F	F	G	X	I	N	W	T	Y	T
Template Known Secondary structure																									G	G	G	S		S																										G	G	G	T	T																		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	D	R	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Y	K	A	D	G	S	V	S	P	D	A	L	A	E	R	T	V	Q	L	F
Template Known Secondary structure		T			T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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