Job Description P75811 Confidence 99.83% Date Thu Jan 5 12:14:28 GMT 2012 Rank 57 Aligned Residues 167 % Identity 13% Template c3bjbE_ PDB info PDB header:transcription regulator Chain: E: PDB Molecule:probable transcriptional regulator, tetr family protein; PDBTitle: crystal structure of a tetr transcriptional regulator from rhodococcus2 sp. rha1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		E	Q	R	A	R	H	V	R	X	L	E	A	A	I	E	L	A	T	E	K	E	L	A	R	V	Q	X	H	E	V	A	K	R	A	G	V	A	I	G	T	L	Y	R	Y	F	P	S	K	T	H	L	F	V	A	V	X	V	D	Q	I	D	R	X	G	.	.	.	.	.	.	V	P	P	G	E	S	P	Q	D	A
Template Known Secondary structure																					S		G	G	G											T											S	S																		.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																	.	.																																														.	.
Query SS confidence																																	.	.																																														.	.
Query Sequence		C	Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	.	.	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	W	F	E	P	G	T	A	R	A	L	D	A	F	I	E	G	M	T	L	H	F	V	T	D	.	.
Query Conservation																																	.	.																																														.	.
Alig confidence																																	.	.																																														.	.
Template Conservation
Template Sequence		V	Y	N	V	L	V	R	A	T	R	G	L	L	R	R	P	A	L	S	T	A	X	I	Q	S	T	S	T	A	N	V	A	S	V	P	D	A	G	K	V	D	R	A	F	R	Q	I	X	L	D	A	A	G	I	E	H	P	T	E	E	D	L	T	A	L	R	L	L	V	Q	L	W	F	G	V	I	Q	S	C	L
Template Known Secondary structure																S													S			T	T	T		G	G	G	T															T		S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	R	V	S	I	P	D	A	E	S	D	I	R	R	A	C
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions