Job Description P75811 Confidence 99.85% Date Thu Jan 5 12:14:28 GMT 2012 Rank 40 Aligned Residues 163 % Identity 13% Template c2yvhA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A	C	Q	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	E	X	I	L	R	T	A	I	D	Y	I	G	E	Y	S	L	E	T	L	S	Y	D	S	L	A	E	A	T	G	L	S	K	S	G	L	I	Y	H	F	P	S	R	H	A	L	L	L	G	X	H	E	L	L	A	D	D	W	D	K	E	L	R	D	I	T	R	D	P	E	D	P	L	E	R	L	R	A	V
Template Known Secondary structure																	S		S	T	T											S	S									S	S	S																			T	T	T	S	S		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	W	F	E	P	G	T	.	.	.	A	R	A	L	D	A	F	I	E	G	M	T	L	H	F	V	T	D	R	K	P	L	S
Query Conservation																																																								.	.	.
Alig confidence												.	.	.	.	.	.																																							.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		V	V	T	L	A	E	N	V	S	R	.	.	.	.	.	.	P	E	L	L	L	L	I	D	A	P	S	H	P	D	F	L	N	A	W	R	T	V	N	H	Q	W	I	P	D	T	D	D	L	E	N	D	A	H	K	R	A	V	Y	L	V	Q	L	A	A	D	G	L	F	V	H	D	Y	I	H	D	D	V	L	S
Template Known Secondary structure								S				.	.	.	.	.	.									G	G	G								T					T	T	T	S					S		S	S																								S	S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	K	R	Q	A	X	L	E	T	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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