Job Description P75811 Confidence 99.85% Date Thu Jan 5 12:14:28 GMT 2012 Rank 35 Aligned Residues 175 % Identity 18% Template c2uxoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hth-type transcriptional regulator ttgr; PDBTitle: ttgr in complex with tetracycline Resolution 2.7 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		R	A	N	D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	.	A
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		K	E	E	A	Q	E	T	R	A	Q	I	I	E	A	A	E	R	A	F	Y	K	R	G	V	A	R	T	T	L	A	D	I	A	E	L	A	G	V	T	R	G	A	I	Y	W	H	F	N	N	K	A	E	L	V	Q	A	L	L	D	S	L	H	E	T	H	D	H	L	A	R	A	S	E	S	E	D	E	V	D	P
Template Known Secondary structure				S		S																			S	T	T											T	S							T	T		S	S												T	T	G	G	G										T	T		S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	A	C	Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	K	.	.	.	.	.	.	.	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	W	.	.	.	.	.	.	.	.	.	.	F	E	P	G	T	A	R
Query Conservation																																					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	C	M	R	K	L	L	L	Q	V	F	N	E	L	V	L	D	A	R	T	R	R	I	N	E	I	L	H	H	K	C	E	F	T	D	D	M	C	E	I	R	Q	Q	R	Q	S	A	V	L	D	C	H	K	G	I	T	L	A	L	A	N	A	V	R	R	G	Q	L	P	G	E	L	D	A	E	R	A	A	V
Template Known Secondary structure																																S				B	T	T	B																												T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	L	D	A	F	I	E	G	M	T	L	H	F	V	T	D	R	K	P	L	S	.	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		A	M	F	A	Y	V	D	G	L	I	R	R	W	L	L	L	P	D	S	V	D	L	L	G	D	V	E	K	W	V	D	T	G	L
Template Known Secondary structure																		G	G	G			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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