Job Description P75811 Confidence 99.84% Date Thu Jan 5 12:14:28 GMT 2012 Rank 50 Aligned Residues 172 % Identity 10% Template c2rasB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	A	X	R	A	R	L	V	D	V	A	Q	A	I	V	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E	D	V	L	A	S	D	L	P	P	R	R	K	X
Template Known Secondary structure																						G	G	G											T	S							T	T		S	S												T	T													S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																													.	.																							.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																							.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	.	.	A	S	R	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	.	.	.	.	.	.	.	.	.	E	Q	W	F	E	P	G	T	A	R	A	L	D	A	F	I	E	G	M	T
Query Conservation																													.	.																							.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	F	F	A	R	R	F	V	V	X	R	R	K	W	E	A	D	P	V	K	L	Q	T	Y	I	E	V	G	N	D	Y	F	E	Q	V	R	S	Y	I	D	L	A	D	H	Y	L	G	E	I	I	G	E	A	X	S	D	G	A	F	S	G	L	E	V	D	E	T	I	S	L	V	N	Q	X	C	A	P	Y	C
Template Known Secondary structure																																																											T		S	T	T														S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		155	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		L	H	F	V	T	D	.	.	R	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		A	L	N	T	X	T	T	F	X	E	R	L	S	E	D	K	L	A	R	I	V	D	A	V	F
Template Known Secondary structure										G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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