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Job DescriptionP75811
Confidence99.83%DateThu Jan 5 12:14:28 GMT 2012
Rank56Aligned Residues176
% Identity13%Templatec2qcoA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70........ .
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Query Sequence  RRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDV. . S
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Template Sequence  PSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGGSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIKNG
Template Known Secondary structure  TTTTT


TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   80.........90.........100.........110.........120.........130....... ..140.......
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Query Sequence  DAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQW. . . . . . . . . . . . FEPGTARALD
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Template Sequence  TLKEILTSFGLAFIEIFNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEKLAVLFC
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   148.150....... ..160.........170.......
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Query Sequence  AFIEGMTLHF. . VTDRKPLSREEILRMVERVA
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Template Sequence  TMLKEPYHHLNVLINAPLKNKKEQKEHVEFVV
Template Known Secondary structure  TT





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   167..170.........180.........190........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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