Job Description P75811 Confidence 99.83% Date Thu Jan 5 12:14:28 GMT 2012 Rank 58 Aligned Residues 174 % Identity 14% Template c2oi8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative regulatory protein sco4313; PDBTitle: crystal structure of putative regulatory protein sco4313 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	A	N	D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	R	Y	R	T	Q	V	R	A	E	I	K	D	H	A	W	E	Q	I	A	T	A	G	A	S	A	L	S	L	N	A	I	A	K	R	X	G	X	S	G	P	A	L	Y	R	Y	F	D	G	R	D	E	L	I	T	E	L	I	R	D	A	Y	R	S	Q	A	D	S	L	R	A	A	A	A	S	G	A	D	L
Template Known Secondary structure		S	S																							T	T	S										T	T								T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	A	C	Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	W	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		A	G	L	A	H	A	L	R	A	W	A	L	D	D	P	Q	R	Y	F	L	I	F	G	T	.	.	.	P	V	P	G	Y	R	A	P	D	D	I	T	E	I	A	A	E	T	X	A	V	I	V	D	A	C	A	A	G	T	D	G	A	F	D	A	H	L	D	T	H	R	Q	W	A	D	R	P	A	P	S	S	A
Template Known Secondary structure																								S	S	.	.	.			T	T					G	G	G	T	T	T	T																	S									S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		P	G	T	A	R	A	L	D	A	F	I	E	G	M	T	L	H	F	V	T	D	R	.	.	.	.	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A	G
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		L	H	R	A	L	S	F	W	S	R	L	H	G	V	L	S	L	E	L	A	G	Q	F	T	G	X	G	F	D	S	A	L	L	F	E	A	E	L	K	D	L	L	G
Template Known Secondary structure																					T	T	T	T	T	T	S		S														S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions