Job Description P75811 Confidence 99.79% Date Thu Jan 5 12:14:28 GMT 2012 Rank 92 Aligned Residues 168 % Identity 14% Template c2fq4A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of the transcriptional regulator (tetr family)2 from bacillus cereus Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	Q	R	R	E	K	I	I	Q	A	T	L	E	A	V	K	L	Y	G	I	H	A	V	T	H	R	K	I	A	T	L	A	G	V	P	L	G	S	M	T	Y	Y	F	S	G	I	D	E	L	L	L	E	A	F	S	S	F	T	E	I	M	S	R	Q	Y	Q	A	F	F	S	D	V	S	D	A	P	G	A
Query Conservation
Alig confidence																																																																					.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		R	N	I	E	T	Q	K	A	I	L	S	A	S	Y	E	L	L	L	E	S	G	F	K	A	V	T	V	D	K	I	A	E	R	A	K	V	S	K	A	T	I	Y	K	W	W	P	N	K	A	A	V	V	X	D	G	F	L	S	A	A	A	A	R	L	P	V	P	.	.	.	.	.	D	T	G	S	A	L	N	D
Template Known Secondary structure																							T	T	T											T											S	S													S								.	.	.	.	.			S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																						.	.	.	.	.	.	.
Query Sequence		C	Q	A	I	T	D	M	I	Y	S	S	Q	V	A	T	P	D	N	M	E	L	M	Y	Q	L	Y	A	L	A	S	R	.	.	.	K	P	L	L	K	T	V	M	Q	N	W	M	Q	R	S	Q	Q	T	L	E	Q	.	.	.	.	.	.	.	W	F	E	P	G	T	A	R	A	L	D	A	F	I	E	G	M	T
Query Conservation																																	.	.	.																						.	.	.	.	.	.	.
Alig confidence																																	.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	I	H	A	T	S	L	A	N	F	L	I	S	R	E	G	T	I	I	N	E	L	V	G	E	G	Q	F	D	S	K	L	A	E	E	Y	R	V	R	Y	F	Q	P	R	R	L	Q	A	K	Q	L	L	E	K	G	I	K	R	G	E	L	K	E	N	L	D	I	E	L	S	I	D	L	I	Y	G	P	I	F
Template Known Secondary structure															S	T	T	T	T										T	T												T																		T	T		S		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	F	V	T	D	R	K	P	L	S	R	E	E	I	L	R	M	V	E	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	L	L	V	T	G	E	K	L	D	D	S	Y	V	H	D	L	V	I	N	A	F
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions