|   |
2 | . | . | . | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
| . | . |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
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| . |
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Query Sequence |   |
T | V | R | V | A | I | N | G | F | . |
G | R | I | G | R | N | V | V | R | A | L | Y | E | S | G | R | R | A | E | I | T | V | V | A | I | N | . |
. |
E | L | A | D | A | A | G | M | A | H | L | L | K | Y | D | T | S | H | G | R | F | A | W | E | V | R | Q | E | R | D | Q | L | F | V | G | D | D | A | I | R | V | L |
Query Conservation |   |
  |
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|
| . |
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|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
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|
| . | . |
|   |   |   |   |   |   |   |
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|
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
Alig confidence |   |
|
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| . |
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| . | . | . |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
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|   |
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|   |   |
|
|   | . | . | . |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
X | L | N | T | L | I | V | G | A | S | G | Y | A | G | A | E | L | V | S | Y | V | N | R | H | P | H | . |
. |
. |
X | T | I | T | A | L | T | V | S | A | Q | S | N | D | A | G | K | L | I | S | D | L | H | P | Q | L | K | G | I | V | D | L | P | L | Q | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T | T |
| B |  |  |  |  |
| G | G | G | T | T | T |
|
|
| B |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |
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|
| . | . | . |
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|  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | |
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130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
|
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|  |  | . |  |  |  |
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
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| . |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
H | E | R | S | L | Q | S | L | P | W | R | E | L | G | V | D | V | V | L | D | C | T | G | V | Y | G | S | R | E | H | G | E | A | H | I | A | A | G | A | K | K | V | . |
L | F | S | H | P | G | S | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | A | T | V | V | Y | G | V |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |
|   |   |   |
|
|
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|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
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| . |
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|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|
|
Alig confidence |   |
. | . | . | . |
|
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |
Template Sequence |   |
. |
. |
. |
. |
X | S | D | V | R | D | F | S | A | D | V | D | V | V | F | L | A | T | A | H | E | V | S | H | D | L | A | P | Q | F | L | Q | A | G | C | V | V | F | D | L | S | G | A | F | R | V | N | D | R | A | F | Y | E | K | Y | Y | G | F | T | H | Q | Y | P | E | L | L | E | Q | A | V | Y | G | L | A | E | W |
Template Known Secondary structure |   |
. | . | . | . |  | S |
| G | G | G | T |
| T | T |
|
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| S | S | T | T | S | S | S |
|  |  |  |  |  |  |  |  |
| S |
|
| S |
|  |  |  |  |  |  |
|  |  |
|
| G | G | G |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
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|  |  |  |  |  |  |  |
|
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|
|
|  |  |  |  |
|
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|
|  |  |
|
|
|
|
Template SS confidence |   |
|
|
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  |   |
|
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|
|
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
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|
Query Sequence |   |
N | Q | D | Q | L | R | A | E | H | R | I | V | S | N | A | S | C | T | T | N | C | I | I | P | V | I | K | L | L | D | D | A | Y | G | I | E | S |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
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|
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|
|
Template Conservation |   |
  |
|   |   |
|   | . |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|
|   |   |
Template Sequence |   |
N | V | D | K | L | N | . |
T | A | N | L | I | A | V | P | G | L | L | K | G | A | A | A | Q | A | V | Q | C | A | N | I | R | F | G | F | A | E |
Template Known Secondary structure |   |
|  |  |  |  | T | . | T |
| S |  |  |  |
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |
| . |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|
Template SS confidence |   |
|
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  |   |
139 | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |