Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 60 Aligned Residues 302 % Identity 19% Template c3uw3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of an aspartate-semialdehyde dehydrogenase from2 burkholderia thailandensis Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	V	R	V	A	I	N	G	F	.	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E
Query Conservation											.
Alig confidence											.																							.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	N	V	G	L	V	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	Q	E	E	G	D	F	D	L	I	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	F	S	T	S	N	A	G	G	K	A	.	.	.	.	.	.	.	.	.	.	P	S	F	A	K	N	E	T	T	L	K	D	A
Template Known Secondary structure									S	T	T	S													T	T	G	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.					S	S		T	T	S	B		.	.	.	.	.	.	.	.	.	.		T	T			S			B				T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.														.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																												.	.	.																							.	.	.	.
Query SS confidence																																												.	.	.																							.	.	.	.
Query Sequence		R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	.	.	.	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	.	.	.	.	A	E	H	R	I	V	S	N	A
Query Conservation																																												.	.	.																							.	.	.	.
Alig confidence										.	.	.	.																															.	.	.																							.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		T	S	I	D	D	L	K	K	.	.	.	.	C	D	V	I	I	T	C	Q	G	G	D	Y	T	N	D	V	F	P	K	L	R	A	A	G	W	N	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	V	I	I	L	D	P	V	N	L	N	V	I	K	D	A	L	V	N	G	T	K	N	F	I	G	G
Template Known Secondary structure		T							T	.	.	.	.		S						S															T	T			S						S	S	T	T	T	T		T	T																			T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																																							190	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	C	T	T	N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	A	Y	H
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	C	T	V	S	L	M	L	M	A	L	G	G	L	F	R	E	N	L	V	D	W	M	T	A	M	T	Y	Q	A	A	S	G	A	G	A	Q	N	M	R	E	L	L	A	Q	M	G	T	L	N	G	A	V	A	A	Q	L	A	D	P	A	S	A	I	L	D	I	D	R	R	V	L	A	A	M	N	G	D	A	M
Template Known Secondary structure																		T	T											B		G	G	G	T																		T	T					T		T	T	S															S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.													.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	.	.	.	.	.	.	R	F	E	A	I	A	V	R	V	P	T	I	N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	S	Q	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	D	L	G	N	G	M	S	R	E	E	W	K	G	G	A	E	T	N	K	I	L	G	K	P	A	M	G	E	P	G	S	V	P	V	D	G	L	C	V	R	I	G	A	M	R	C	H	S	Q	A	L	T	I	K	L	K	K	D	V	P	L
Template Known Secondary structure				T	T	T	S	S			T	T	S		B	S			S		B		S	S	S		B															T				T	T	S	T	T										B		S		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																									.	.	.	.																																								.
Query SS confidence																									.	.	.	.																																								.
Query Sequence		N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	.	.	.	.	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D	N	E	.	W	G	F	A	N	R	M	L	D	T	T	L	A
Query Conservation																									.	.	.	.																																								.
Alig confidence																	.	.							.	.	.	.																									.															.
Template Conservation																	.	.																																			.
Template Sequence		D	E	I	N	G	I	L	A	S	A	N	D	W	V	K	.	.	V	V	P	N	E	R	E	A	S	M	R	D	L	S	P	A	K	V	T	G	T	L	S	V	P	V	G	R	L	R	K	L	A	M	.	G	G	E	Y	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	I
Template Known Secondary structure										T	S		S	S			.	.				S	S								S	S					T	T	S	S											T	T	.		T	T										T	T
Template Predicted Secondary structure																	.	.																																			.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		333
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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