Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 6 Aligned Residues 333 % Identity 48% Template c3docD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		A	V	R	V	A	I	N	G	F	G	R	I	G	R	N	I	L	R	A	I	V	E	S	G	R	.	T	D	I	Q	V	V	A	I	N	D	L	G	P	V	E	T	N	A	H	L	L	R	Y	D	S	V	H	G	R	F	P	K	E	V	E	V	A	G	D	T	I	D	V	G	Y	G	P	I	K	V	H	A	V	R
Template Known Secondary structure									S		S														T		.		S									S	S													T	T	T		S		S	S						T	T				S	S	S	S								S
Template Predicted Secondary structure																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I	I
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		N	P	A	E	L	P	W	K	E	E	N	V	D	I	A	L	E	C	T	G	I	F	T	S	R	D	K	A	A	L	H	L	E	A	G	A	K	R	V	I	V	S	A	P	A	D	G	A	.	D	L	T	V	V	Y	G	V	N	N	D	K	L	T	K	D	H	L	V	I	S	N	A	S	C	T	T	N	C	L	A
Template Known Secondary structure			G	G	G	S						T		S						S	S	S			S					T						T		S					S	S			T	T		.	S		B			T	T	T	S	G	G	G			S	S		S
Template Predicted Secondary structure																																																		.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	Q	V	L	N	D	T	I	G	I	E	K	G	F	M	T	T	I	H	S	Y	T	G	D	Q	P	T	L	D	T	M	H	K	D	L	Y	R	A	R	A	A	A	L	S	M	I	P	T	S	T	G	A	A	K	A	V	G	L	V	L	P	E	L	K	G	K	L	D	G	V	A	I	R	V	P	T	P	N
Template Known Secondary structure											T															T	T	S		S	S					S	S	T	T	T	T	S		T	T	T	S																S	G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D	N	E	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	V	V	D	L	T	F	I	A	K	R	E	T	T	V	E	E	V	N	N	A	I	R	E	A	A	N	G	R	L	K	G	I	L	G	Y	T	D	E	K	L	V	S	H	D	F	N	H	D	S	H	S	S	V	F	H	T	D	Q	T	K	V	M	D	G	T	M	V	R	I	L	S	W	Y	D	N	E	W	G
Template Known Secondary structure												S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T				S					G	G	G					T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	N	R	M	L	D	T	T	L	A	M	A	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	S	R	M	S	D	T	A	V	A	L	G	K	L
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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