Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 22 Aligned Residues 314 % Identity 15% Template c2yyyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																						.	.	.
Query SS confidence																																							.																						.	.	.
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	.	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	.	.	.	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V
Query Conservation																																							.																						.	.	.
Alig confidence																									.	.	.												.																						.	.	.														.	.	.	.	.
Template Conservation																									.	.	.																																																		.	.	.	.	.
Template Sequence		P	A	K	V	L	I	N	G	Y	G	S	I	G	K	R	V	A	D	A	V	S	M	Q	.	.	.	D	D	M	E	V	I	G	V	T	K	T	K	P	D	F	E	A	R	L	A	V	E	K	G	Y	K	L	F	V	A	I	P	D	N	E	R	V	K	L	F	E	D	A	G	I	P	V	E	G	.	.	.	.	.
Template Known Secondary structure											S													S	.	.	.	S	S									S	S		S									T	T						S	S													T						.	.	.	.	.
Template Predicted Secondary structure																									.	.	.																																																		.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	H	E	R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	.	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T
Query Conservation																																																							.
Alig confidence		.	.	.	.								.	.	.																																								.															.
Template Conservation		.	.	.	.								.	.	.																																																							.
Template Sequence		.	.	.	.	T	I	L	D	I	I	E	.	.	.	D	A	D	I	V	V	D	G	A	P	K	K	I	G	K	Q	N	L	E	N	I	Y	K	P	H	K	V	K	A	I	L	Q	G	G	E	K	A	K	D	V	E	D	N	F	N	A	L	W	S	Y	N	R	C	Y	.	G	K	D	Y	V	R	V	V	S	C	N
Template Known Secondary structure		.	.	.	.	B	G	G	G	T	G	G	.	.	.	G		S								T	T									T	T	T	T	T	T							T	T	S		G	G	G	S	S					T	T	T	T	T	T	T	T	T	.	T		S
Template Predicted Secondary structure		.	.	.	.								.	.	.																																																							.
Template SS confidence
						74	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		T	T	G	L	C	R	I	L	Y	A	I	N	S	I	A	D	I	K	K	A	R	I	V	L	V	R	R	A	A	D	P	N	D	D	K	T	G	P	V	.	.	.	.	.	.	N	A	I	T	P	N	P	V	T	V	P	S	H	H	G	P	D	V	V	S	V	V	P	E	F	E	G	K	I	L	T	S	A	V	I
Template Known Secondary structure														T	T	S													S	S		T	T		S	S				S	.	.	.	.	.	.	S					S	S	S	S	S	S		T										G	G	G	T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																												.	.	.
Query SS confidence																																						.	.	.	.																												.	.	.
Query Sequence		V	P	T	I	N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	.	.	.	.	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	.	.	.	T	Q	T	R	V	S	G	A	H	L
Query Conservation																																						.	.	.	.																												.	.	.
Alig confidence																																						.	.	.	.																	.											.	.	.
Template Conservation																																																										.
Template Sequence		V	P	T	T	L	M	H	M	H	T	L	M	V	E	V	D	G	D	V	S	R	D	D	I	L	E	A	I	K	K	T	P	R	I	I	T	V	R	A	E	D	G	F	S	S	T	A	K	I	I	E	Y	G	R	D	L	.	G	R	L	R	Y	D	I	N	E	L	V	V	W	E	E	S	I	N	V	L	E	N	E
Template Known Secondary structure			S			S												S														S	T	T						G	G	G	T			S												.	T		G	G	G				S					G	G	G					T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	T	L	V	W	C	D	N	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M	A	T	V	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	L	M	Q	A	V	H	Q	E	S	I	V	I	P	E	N	I	D	C	I	R	A	M	L	Q	M	E	E
Template Known Secondary structure										T	T	T	T	T												T	T			S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions