Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 59 Aligned Residues 294 % Identity 23% Template c2yv3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase from thermus2 thermophilus hb8 Resolution 2.70 Å

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		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	R	V	A	I	N	G	F	.	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R
Query Conservation										.
Alig confidence										.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		M	R	V	A	V	V	G	A	T	G	A	V	G	R	E	I	L	K	V	L	E	A	R	N	F	.	P	L	S	E	L	R	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	R	S	A	G	V	R	L	A	F	R	G	E	E	I	P	V	.	.	.	.
Template Known Secondary structure								T	T	T	S													T	T		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	S						T	T						.	.	.	.
Template Predicted Secondary structure																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.																								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	.	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I
Query Conservation																																									.
Alig confidence		.	.																																						.
Template Conservation		.	.
Template Sequence		.	.	E	P	L	P	E	G	P	L	P	V	D	L	V	L	A	S	A	G	G	G	I	S	R	A	K	A	L	V	W	A	E	G	G	A	L	V	V	D	N	S	S	A	W	R	Y	E	P	W	V	P	L	V	V	P	E	V	N	R	E	K	I	F	Q	H	R	G	I	I	A	N	P	N	C	T	T	A	I	L
Template Known Secondary structure		.	.					S	S			S		S						S		S													T	T							S	T	T	T	T	T		T	T	S		B							G	G	G	G	G	G		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.													.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	A	L	W	P	L	H	R	A	F	Q	A	K	R	V	I	V	A	T	Y	Q	A	A	S	G	A	G	A	K	A	M	E	E	L	L	T	E	T	H	R	F	L	H	G	E	A	P	K	A	E	A	F	A	H	P	L	P	F	N	V	I	P	H	I	D	A	F	Q	E	N	G	Y	T	R	E	E	M	K	V
Template Known Secondary structure										T	T	T											B		G	G	G	T		S															T	T						S	S	S	S	S			T	T			B	S			S		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I	N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	.	.	.	.	.	D	F	N	H
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.														.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		V	W	E	T	H	K	I	F	G	D	D	T	I	R	I	S	A	T	A	V	R	V	P	T	L	R	A	H	A	E	A	V	S	V	E	F	A	R	P	V	T	P	E	A	A	R	E	V	L	K	E	A	.	.	.	.	.	.	P	G	V	E	V	V	D	E	P	E	A	K	R	Y	P	M	P	L	T	A	S	G
Template Known Secondary structure										T		S			B							B		S		S	S											S	S												T	T	S	.	.	.	.	.	.	T	T						B	G	G	G	T	B				S	T	T	T	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D	N	.	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M
Query Conservation																														.
Alig confidence																.														.
Template Conservation																.
Template Sequence		K	W	D	V	E	V	G	R	I	R	K	S	L	A	.	F	E	N	G	L	D	F	F	V	V	G	D	Q	L	L	K	G	A	A	L	N	A	V	Q	I	A	E	E	W
Template Known Secondary structure			S	S										S	S	.	S	T	T										T	T
Template Predicted Secondary structure																.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions