Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 56 Aligned Residues 304 % Identity 22% Template c2qz9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 ii from vibrio cholerae Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	V	R	V	A	I	N	G	F	.	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E
Query Conservation											.
Alig confidence											.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		Q	F	N	V	A	I	F	G	A	T	G	A	V	G	E	T	M	L	E	V	L	Q	E	R	E	F	.	P	V	D	E	L	F	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	E	R	S	E	G	K	T	Y	R	F	N	G	K	T	V	R	V	.	.	.
Template Known Secondary structure									T	T	T	S													T	T		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	T	T						T	T						.	.	.
Template Predicted Secondary structure																												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																														.																					.	.
Query SS confidence																																														.																					.	.
Query Sequence		R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	.	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	.	.	A	E	H	R	I	V	S	N	A	S	C	T	T
Query Conservation																																														.																					.	.
Alig confidence											.	.																																		.																					.	.
Template Conservation											.	.
Template Sequence		Q	N	V	E	E	F	D	W	S	.	.	Q	V	H	I	A	L	F	S	A	G	G	E	L	S	A	K	W	A	P	I	A	A	E	A	G	V	V	V	I	D	N	T	S	H	F	R	Y	D	Y	D	I	P	L	V	V	P	E	V	N	P	E	A	I	A	E	F	R	N	R	N	I	I	A	N	P	N	C	S	T
Template Known Secondary structure				G	G	G			G	G	.	.	G		S						S															T	T							S	S	T	T	T	T		T	T	S		B			T	T	T		G	G	G	G	G	G	G	G	T	T	S
Template Predicted Secondary structure											.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	M	L	V	A	L	K	P	I	Y	D	A	V	G	I	E	R	I	N	V	T	T	Y	Q	S	V	S	G	A	G	K	A	G	I	D	E	L	A	G	Q	T	A	K	L	L	N	G	Y	P	A	E	T	N	T	F	S	Q	Q	I	A	F	N	C	I	P	Q	I	D	Q	F	M	D	N	G	Y	T	K	E	E
Template Known Secondary structure																												G	G	G	G																T	T	T						S	S	S	S	S			T	T			B	S			S		B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
								219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I	N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																		.	.	.
Template Conservation																																																									.	.	.
Template Sequence		M	K	M	V	W	E	T	Q	K	I	F	N	D	P	S	I	M	V	N	P	T	C	V	R	V	P	V	F	Y	G	H	A	E	A	V	H	V	E	T	R	A	P	I	D	A	E	Q	V	M	D	M	L	E	Q	T	.	.	.	D	G	I	E	L	F	R	G	A	D	F	P	T	Q	V	R	D	A	G	G	K	D
Template Known Secondary structure												T	T		T	T									B		S		S	S											S	S													T	S	.	.	.	T	T						T	T										T	T		S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D	N	.	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M	A	T	V	A	F
Query Conservation																												.
Alig confidence														.														.
Template Conservation														.
Template Sequence		H	V	L	V	G	R	V	R	N	D	I	S	.	H	H	S	G	I	N	L	W	V	V	A	D	N	V	R	K	G	A	A	T	N	A	V	Q	I	A	E	L	L	V	R	D	Y	F
Template Known Secondary structure		S										T	T	.	S	S	S										T	T	T	T	T	T
Template Predicted Secondary structure														.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions