Job Description P0A9B6 Confidence 92.27% Date Thu Jan 5 11:09:49 GMT 2012 Rank 347 Aligned Residues 79 % Identity 16% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R
Query Conservation
Alig confidence																																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	C	K	I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	.	.	.	.	.	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	K
Template Known Secondary structure											S												T	T	T	S		S							S		.	.	.	.	.														T	T	T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.														.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		D	Y	N	V	S	A	.	.	.	.	N	S	K	L	V	I	I	T	A	G	A
Template Known Secondary structure		S	G	G	G	G	T	.	.	.	.	T									S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		81	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions