Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 20 Aligned Residues 308 % Identity 39% Template c2i5pO_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase isoform 1 from k. marxianus Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	.	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E
Query Conservation																																							.
Alig confidence																											.	.	.										.
Template Conservation																											.	.	.
Template Sequence		M	V	S	I	A	I	N	G	F	G	R	I	G	R	L	V	L	R	I	A	L	E	R	K	N	.	.	.	I	D	V	V	A	I	N	D	P	F	I	S	V	D	Y	A	A	Y	M	F	K	Y	D	S	T	H	G	K	Y	K	G	E	V	S	H	D	G	S	N	L	I	I	N	G	K	K	V	A	V	F	Q	E
Template Known Secondary structure											S											T	T		T	T	.	.	.									T	T	S													T	T	T				S	S						S	S					T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I
Query Conservation
Alig confidence																																																			.	.															.
Template Conservation																																																			.	.															.
Template Sequence		K	D	P	A	T	L	P	W	G	K	L	G	V	D	I	A	V	D	S	T	G	V	F	K	E	L	D	S	A	Q	K	H	I	D	A	G	A	K	K	V	V	I	T	A	P	S	K	T	A	.	.	P	M	F	V	V	G	V	N	E	D	K	Y	N	G	.	E	K	I	V	S	N	A	S	C	T	T	N	C	L
Template Known Secondary structure		S	S	G	G	G	S		T	T	T	T	T		S						S	S	S	S		S										T	T		S					S	S			S	S	S	.	.		B			T	T	T	T	G	G	G			S	.		S
Template Predicted Secondary structure																																																			.	.															.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	I	A	K	I	I	N	D	E	F	G	I	E	E	G	L	M	T	T	V	H	S	I	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	Q	G	K	L	T	G	M	A	F	R	V	P	T	T
Template Known Secondary structure												T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T	T	T					S	G	G	G	T	T	S									S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D	N	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	S	V	V	D	L	T	V	K	L	V	K	A	A	T	Y	D	E	I	K	A	A	V	K	K	V	S	E	G	K	L	K	D	V	V	G	Y	T	E	D	A	V	V	S	S	D	F	L	G	D	T	H	S	T	I	F	D	A	A	A	G	I	Q	L	S	P	K	F	V	K	L	V	A	W	Y	D	N	E	Y
Template Known Secondary structure		S											S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T			S	S					T	T	T						T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	A	N	R	M	L	D	T	T	L	A	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	S	T	R	V	V	D	L	V	E	H	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions