Job Description P0A9B6 Confidence 88.46% Date Thu Jan 5 11:09:49 GMT 2012
Rank 409 Aligned Residues 79
% Identity 23% Template c2fnzA_
PDB info
PDB header: oxidoreductaseChain: A: PDB Molecule: lactate dehydrogenase;
PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid)
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
T V R V A I N G F G R I G R N V V R A L Y E S G R R A E I T V V A I N E L A D A A G M A H L L K Y D T S H G R F A W E V R Q E R D Q L F V G D D A I R V L H E R
Query Conservation  
                                                                                         
Alig confidence  
. . . . . . . . . . . . . . . . . .
Template Conservation  
                          . . .     . . . . . . . . . . . . . . .                                                          
Template Sequence  
R R K I A V I G S G Q I G G N I A Y I V G K D N L .
.
.
A D V V L .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
F D I A E G I P Q G K A L D I T H S M V M F G S T S K V I G T N
Template Known Secondary structure  
S T . . . S . . . . . . . . . . . . . . . S S S S T
Template Predicted Secondary structure  
. . . . . . . . . . . . . . . . . .
Template SS confidence  
   
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . .
. . . . .
50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
 
   
82 . . . . . . . 90 . . . . . . . . . 100 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
S L Q S L P W R E L G V D V V L D C T G V
Query Conservation  
               
Alig confidence  
. . . .
Template Conservation  
      . . . .      
Template Sequence  
D Y A D I S .
.
.
.
G S D V V I I T A S I
Template Known Secondary structure  
G G G G T . . . . T S
Template Predicted Secondary structure  
. . . .
Template SS confidence  
   
84 . . . . .
90 . . . . . . . . . 100
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]