Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 11 Aligned Residues 330 % Identity 44% Template c2ep7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: structural study of project id aq_1065 from aquifex aeolicus vf5 Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		A	I	K	V	G	I	N	G	F	G	R	I	G	R	S	F	F	R	A	S	W	G	R	E	E	.	.	.	I	E	I	V	A	I	N	D	L	T	D	A	K	H	L	A	H	L	L	K	Y	D	S	V	H	G	I	F	K	G	S	V	E	A	K	D	D	S	I	V	V	D	G	K	E	I	K	V	F	A	Q	K
Template Known Secondary structure											S										T	T	T		T	T	.	.	.									S	S													T	T	T				S	S						S	S					T	T									S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	.	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I
Query Conservation																																																																	.
Alig confidence																																																		.															.
Template Conservation																																																		.
Template Sequence		D	P	S	Q	I	P	W	G	D	L	G	V	D	V	V	I	E	A	T	G	V	F	R	D	R	E	N	A	S	K	H	L	Q	G	G	A	K	K	V	I	I	T	A	P	A	K	N	P	.	D	I	T	V	V	L	G	V	N	E	E	K	Y	N	P	K	E	H	N	I	I	S	N	A	S	C	T	T	N	C	L
Template Known Secondary structure		S	G	G	G							T		S						S	S	S			S					T	T	T	T	T	T	T		S					S	S			S	S		.	S					T	T	T	T	G	G	G			T	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	C	V	K	V	L	N	E	A	F	G	V	E	K	G	Y	M	V	T	V	H	A	Y	T	N	D	Q	R	L	L	D	L	P	H	K	D	F	R	R	A	R	A	A	A	I	N	I	V	P	T	T	T	G	A	A	K	A	I	G	E	V	I	P	E	L	K	G	K	L	D	G	T	A	R	R	V	P	V	P
Template Known Secondary structure																											T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G									T	T	T	T	G	G	G	T	S	G	G	G	T	T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure															.																		.	.	.	.	.	.	.
Query SS confidence															.																		.	.	.	.	.	.	.
Query Sequence		N	V	T	A	I	D	L	S	V	T	V	K	K	.	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	.	.	.	.	.	.	.	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T
Query Conservation															.																		.	.	.	.	.	.	.
Alig confidence															.																		.	.	.	.	.	.	.																																					.
Template Conservation																																																																												.
Template Sequence		D	G	S	L	I	D	L	T	V	V	V	N	K	A	P	S	S	V	E	E	V	N	E	K	F	R	E	A	A	Q	K	Y	R	E	S	G	K	V	Y	L	K	E	I	L	Q	Y	C	E	D	P	I	V	S	T	D	I	V	G	N	P	H	S	A	I	F	D	A	P	L	T	Q	V	I	D	.	N	L	V	H	I
Template Known Secondary structure		S											S	S			S																		T	T			G	G	G	T	T	S						S				G	G	G	G	T	T				S					G	G	G					T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	W	C	D	N	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M	A	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	W	Y	D	N	E	W	G	Y	S	C	R	L	R	D	L	V	I	Y	L	A	E	R
Template Known Secondary structure							T	T																T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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