Job Description P0A9B6 Confidence 84.66% Date Thu Jan 5 11:09:49 GMT 2012 Rank 452 Aligned Residues 140 % Identity 22% Template c2d4aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of the malate dehydrogenase from aeropyrum pernix Resolution 2.87 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R	S	L	Q
Query Conservation
Alig confidence																								.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	I	L	G	A	G	K	V	G	M	A	T	A	V	M	L	M	M	R	G	Y	.	D	D	L	L	L	I	A	R	T	P	.	G	K	P	Q	G	E	A	L	D	L	A	H	A	A	A	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	R	I	S	G	S	N	S	Y	E
Template Known Secondary structure								S														T		.	S							S	S	T	.	T																	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		G	G
Template Predicted Secondary structure																								.											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.											.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	.	.	.	.	.	.	.	.	.	.	R	A	E	H	R	I	V	S	N	A	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																																			.	.	.	.	.														.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation					.	.	.	.																																			.	.	.	.	.																															.	.
Template Sequence		D	M	R	.	.	.	.	G	S	D	I	V	L	V	T	A	G	I	G	R	K	L	E	A	N	A	N	T	M	A	D	L	A	E	K	I	K	A	Y	A	K	.	.	.	.	.	D	A	I	V	V	I	T	T	N	P	V	D	A	M	T	Y	V	M	Y	K	K	T	G	F	P	R	E	R	V	I	.	.	G	F
Template Known Secondary structure		G	G	T	.	.	.	.	T		S													T	T																	T	.	.	.	.	.	T	S							S	S													T			G	G	G			.	.
Template Predicted Secondary structure					.	.	.	.																																			.	.	.	.	.																															.	.
Template SS confidence
		64	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	T	N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	I	L	D	S	A	R	M	A	Y	Y	I	S	Q	K	L	G	V
Template Known Secondary structure																			T	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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